Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10- 12] 670 sequences; 11,556,258 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq612 107 2e-18 seq268 98.7 1e-15 >seq612 Length=38638 Score = 107 bits (118), Expect = 2e-18 Identities = 496/775 (64%), Gaps = 23/775 (3%) Strand=Plus/Plus Query 132666 CATAAAATCCAAGGGGTT---GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAG 132722 ||| ||||| |||||||| | | ||| ||| | |||| | |||| || |||| | Sbjct 8 CATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAA-AG--CGACCAA 64 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAG 132782 ||| |||||||| |||||||| | |||||| ||| || || | || |||| Sbjct 65 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 124 Query 132783 ACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT 132842 | || || | || || || | | ||| || || | || || |||||||| || Sbjct 125 AGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAAT 184 Query 132843 TTCCCTAACGCGCGCCGCG-CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAA 132901 || ||| || | | || | ||| | |||||| ||||| |||||| |||| Sbjct 185 TTTTTCAACAATGGCTGGGTCTGGTTTGTT-CTTCAAATGGGCGAACAACAAGCATGCAA 243 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 ||||| ||||| || ||||| || | || | ||||||| || || || ||||||| Sbjct 244 AGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCA 303 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 | | || | ||||| | ||| || |||| ||| || || || || ||||| || | Sbjct 304 TCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTT 363 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAG 133080 | | || || || || || || | || || ||| ||| || | || | |||||| Sbjct 364 CAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTG-GATCCAT 422 Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140 | | |||||||||||||| || || || || || | ||||| || ||||| Sbjct 423 CTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAA- 481 Query 133141 CGGAGTT---TCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197 || || | |||| | | | ||| || ||||| | || || |||| Sbjct 482 --GAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTTTCA 539 Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC 133257 ||||| | || || || |||||| || ||||| || | | ||||| | || Sbjct 540 GAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGG 599 Query 133258 ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317 ||||| | ||| || |||| ||||| || || || ||||| ||||||||| Sbjct 600 ACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAA 659 Query 133318 AAGGCCAGCACGTGCTTG--ATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGT 133372 ||||| || || || | |||||| | |||||| ||||||| | | ||||| Sbjct 660 AAGGCAAGAAC--TCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGT 717 Query 133373 CGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 | | | ||||| |||| || | || || ||||||| || || || ||||| Sbjct 718 CATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 772 >seq268 Length=40227 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || ||||||||||| | || || || || || Sbjct 12945 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 12886 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| ||||||| ||||| || || || || | || || Sbjct 12885 GACACGATCGATAACG-TTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 12827 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| || | || | || || || ||||| || |||| | ||| | |||||||| Sbjct 12826 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 12767 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 12766 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 12719 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || || || || ||| | || || || | || Sbjct 12489 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 12430 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| |||| || || ||||| || || || | || || Sbjct 12429 GACACTATTGACAACGTCAAAAGTAAAATTCAA-GATAAAGAAGGTATCCCTCCGGATCA 12371 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | |||| || || || || || || || | | ||| | |||||||| Sbjct 12370 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 12311 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| || | |||||||| || Sbjct 12310 CATCCAAAAGGAATCTACTCTTCACYTGGTGTTGAGATTGAGAGGTGG 12263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168611052800