Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10-
12] 670 sequences; 11,556,258 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq484 219 5e-52
seq612 205 1e-47
seq351 165 9e-36
>seq484
Length=24587
Score = 219 bits (242), Expect = 5e-52
Identities = 1114/1763 (63%), Gaps = 60/1763 (3%)
Strand=Plus/Plus
Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072
|||| ||| || ||||||||||| |||||||| |||| || |||||||||||||||
Sbjct 17119 GTTCTTAAGTAGTACATACCAGTTTTTAAACCCTTCTTCCAACCGTAGAAATGCATACTA 17178
Query 47073 GTTAATTTAGA-ATAACTAGGTTCT-GAAATATGAATATTAAGAGATTGACTCTGATCAA 47130
|| | ||| || | ||| || | || | || ||| | || ||| |||||| |
Sbjct 17179 GTAATCTTACCCATTGAT-GGTGCTTGCAAGAA-AAGATTCAAGGAATGAGACTGATCGA 17236
Query 47131 T--AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATAC 47188
| | ||| | | |||||| ||||||| | ||| | |||| | || ||||| ||
Sbjct 17237 TGTAGATGG--CACGATCAGCAGCCATATTGATAATGGTCTTTTGAGAGATTTCCCAGAC 17294
Query 47189 TGTTTTATA-AATTTGTTTAATGTCTTCTGGGAGATTAG-TATT--TTGAATAGATCCTC 47244
||||| || |||| || ||| |||| ||| | ||| | || ||||||||| ||
Sbjct 17295 GGTTTTGTATAATTCCTTCAAT-TCTTGTGGCACATTTGGTAAGCCTTGAATAGAACCA- 17352
Query 47245 Cgttttctataatt-----ttgttttttaat-tcatttgaccaaagttttcgttc-agtt 47297
|||| | ||||| |||||| || | |||| ||||| | || | |
Sbjct 17353 --TTTTGTGTAATTAGATATTGTTTCATACTATCATC---CCAAATACCCAGGTCGACTA 17407
Query 47298 aat---gtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGG 47354
||| || | ||| ||| ||||||||| ||| ||||| ||||| || || | |||
Sbjct 17408 AATCACGTAGT--AAATATG--GATTAACAACTTGGAATTCACCAGACAGGACACGACGA 17463
Query 47355 CTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTT 47414
|| || || || |||||| | | ||||||||| |||| |||||| | ||||
Sbjct 17464 GAGTACATGTTTGAAGTCACTGGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTT 17523
Query 47415 GATGCTGTAGGCATGGATGCAACTAATAAGCTA-TTTCTTACTCCATATTTTTGTATCTN 47473
|| || || ||||| | ||| | || | | | ||||||| |||| ||| || |
Sbjct 17524 GAGGCGGTTGGCATTGGTGCCA-TAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTC 17582
Query 47474 NNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTG 47533
|| ||||||||| | | |||| | | ||||| | ||| ||||
Sbjct 17583 CTTTCTTAAGGTTTCCCAATCCCACATGCCAAATGGTTTAGCGTTCCACATATCGAATTG 17642
Query 47534 AAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGC 47593
| ||| || || |||||||| | | | || ||| ||| | | || ||
Sbjct 17643 TAAAATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGC 17702
Query 47594 GAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAG 47653
| |||||| ||||| | | | || || || ||||| || |||| | |||||||
Sbjct 17703 CAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAG 17762
Query 47654 ATTCCTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNA-ATGTATCTGCCAATC 47712
| | |||||| |||||||| || || | | ||||| ||||| |
Sbjct 17763 AGTTTGAGCTTCTTCCGATTCAAAGGG-TAGACGCAACATCATATAAGTATCGGCCAAAC 17821
Query 47713 CTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATG 47772
| || ||||||| | |||| |||||||| | |||| ||| ||| || || | ||
Sbjct 17822 CCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAATTTCTAGCCTCGGGAACTG 17881
Query 47773 GATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTC 47832
|||| | || || |||| | | || | |||| ||
Sbjct 17882 GATAGTAATTACGGTCGATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGT 17941
Query 47833 TTAATTTATTAAAATCAAA-CTTGTTATTTATAACA--------AACCT------ATTA- 47876
|||| | | |||| | | |||| ||| || || ||||| ||
Sbjct 17942 GTAATCTCTCGAAATTATAGCTTGCAGTTT-TACCATCTTCTGAAACCTCAACGAATGCC 18000
Query 47877 ---AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATT 47933
|| || ||||| |||| |||||| || || |||| || | ||||| |
Sbjct 18001 GGTAGGGCAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACG 18060
Query 47934 ATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTG 47993
|||||| ||||| ||| ||||||||||||| || || || || || | ||
Sbjct 18061 ATTTCACAACATAAGTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTG 18120
Query 47994 TTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATA 48053
|||||||||||||| |||| ||| |||||||| || |||||| |||| | || | ||
Sbjct 18121 TTACATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATG 18180
Query 48054 GATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTA 48113
| | ||| | | | | | ||||| | | | || | | || |||||| |
Sbjct 18181 GCATACCACA-ACTTTTGGGCTTTA--ATTGTTTTACCACGACCTTCTCTTTCGTAACGA 18237
Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173
||||||| | ||||||||||| || |||||| |||||| || || || | ||
Sbjct 18238 GTATATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGGC 18297
Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233
| | || | |||| | |||| | || || | |||| || | || || |||||
Sbjct 18298 GAAAATAAAGTCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGGTCAGGGATCCAT 18357
Query 48234 AGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCA 48293
||||| || ||||| || | | | |||||| || ||| | || | | ||
Sbjct 18358 AGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCG 18417
Query 48294 AGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGT 48353
| |||||| | ||||| ||||||||||| || || | | || | |||| ||||
Sbjct 18418 ACAAAGTCGAAGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTC 18477
Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413
|| ||||| || || || | ||| | ||||||||| || |||| | | ||| || |
Sbjct 18478 TTGTTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATC 18537
Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473
| || ||||| |||| ||||| || | |||||| || | | | || || |
Sbjct 18538 AACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTG 18597
Query 48474 ATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCA 48533
|| || ||| | ||||||||| |||| || || | |||||| ||| | ||||||
Sbjct 18598 ATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCA 18657
Query 48534 TAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGA 48593
||||| ||||| ||| ||||| |||| | || ||||| ||||||||| |||
Sbjct 18658 TAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGA 18717
Query 48594 TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC 48653
|| || || | || ||||| ||||| || || ||| | || || | || | |
Sbjct 18718 TGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATC 18777
Query 48654 AATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGC 48713
|| ||||| || | | ||||| || ||||| | ||| ||||||| | ||||||
Sbjct 18778 AAATTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGC 18837
Query 48714 ATTAACATATATTGAGGTCTTTC 48736
|||| || || ||||| | |||
Sbjct 18838 ATTACCAAATGCTGAGGACGTTC 18860
>seq612
Length=38638
Score = 205 bits (226), Expect = 1e-47
Identities = 430/632 (68%), Gaps = 13/632 (2%)
Strand=Plus/Plus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| ||| |||||||| || || | || |||||||||| |||||||| || |||
Sbjct 228 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 287
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| |||||||| ||||||| ||||| ||||| |||||||| || || ||||| || ||
Sbjct 288 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 347
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATC 19130
|| || || | |||||| | | ||||| |||||||||||||| ||| ||| | || ||
Sbjct 348 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGGCGTC 406
Query 19131 ATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTC 19190
| | || |||||| | | ||||| || ||||||| | ||| || || |
Sbjct 407 AGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTG 466
Query 19191 TATAGAATTAAATAGATACATACGCTCATCTGTA---TCTTTAACATATGCATCTATCAA 19247
|| | ||| || | | | || | || ||| || || || | || | ||| |||||
Sbjct 467 AATGGCATTGAACA-AGA-ATTCACT-TTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 523
Query 19248 TAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCT 19307
|| ||| |||| || ||||||||||| || || || || ||||| |||| |
Sbjct 524 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 583
Query 19308 TGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCC 19367
||| |||| || || ||||| | | || |||| ||||| ||||||||||| || ||
Sbjct 584 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 643
Query 19368 ATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA 19427
||| ||| || ||||| || | || ||| ||| | | || | | ||| |
Sbjct 644 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGT-TCTCGTTCA 702
Query 19428 T----GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAG 19483
| | ||||| |||| ||||| ||||| ||||| | ||||||| | ||||| ||||
Sbjct 703 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 762
Query 19484 AAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAA 19543
|||| || || || || | ||| || ||| | || | ||||| || | ||||
Sbjct 763 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACAG 822
Query 19544 ATCTATTTTTATTTTCTTTAAGAATAGGTTCC 19575
||| | || | ||| || | | |||||||
Sbjct 823 TTCTCTCCTTGTCTTCATTCAACAAAGGTTCC 854
>seq351
Length=33461
Score = 165 bits (182), Expect = 9e-36
Identities = 807/1270 (64%), Gaps = 43/1270 (3%)
Strand=Plus/Plus
Query 47958 TTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATA 48017
||||| ||| || |||| |||||| ||||||| || |||||||||| |
Sbjct 23661 TTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACG 23720
Query 48018 AAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTT 48077
|||||||| |||||||| | |||| ||| | || || | ||| | | | | | ||||
Sbjct 23721 AAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTTTGGGCTTT 23779
Query 48078 ATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCC 48137
| || || | | || | ||||| ||||||| |||||| || ||
Sbjct 23780 G--ATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCA 23837
Query 48138 CCATACACATTATCT-AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATC 48196
|| || ||| | || || |||||| | | ||| | | |||| ||| | |||
Sbjct 23838 CCGTA-ACAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATT 23896
Query 48197 ATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGT 48256
| || || | |||| || | ||| || ||||| ||||| || ||||| || |
Sbjct 23897 TTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGC 23956
Query 48257 TCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATG 48316
| | ||| || || || ||| | ||| |||| ||| || | |||||||||||
Sbjct 23957 ACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATG 24016
Query 48317 CCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATA 48376
||||||||| | || | || | |||| |||| ||||||||| || || || | |||
Sbjct 24017 CCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATA 24076
Query 48377 TCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGT 48436
| |||||| || || |||| | | ||| || | | ||| || || |||| || ||
Sbjct 24077 ACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGT 24136
Query 48437 TCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGC 48496
|| | ||| ||| ||| | | | || ||| || | ||| |||||||| ||
Sbjct 24137 ACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGC 24196
Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556
|||| || || | |||||| || | ||| || ||||| || || ||| || ||
Sbjct 24197 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 24256
Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616
|||| | | |||||| |||||||| || | ||| || | ||| || ||
Sbjct 24257 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAA 24316
Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676
|||||||| || ||| |||| |||| || | ||| ||||| ||||| | | |||
Sbjct 24317 CGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGC 24376
Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736
|| ||||| | || || |||| | || | ||| | | || ||| || | |||
Sbjct 24377 CTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTC 24436
Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796
| | || || ||| | | | ||| || |||||| |||||||||||||||||
Sbjct 24437 GGCGACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 24496
Query 48797 GTTGTA-TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTT-TA 48854
|||| |||||| || | |||| | ||||| || || | | | ||||| | || |
Sbjct 24497 ACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCA 24555
Query 48855 T----ATACT----ACATCCATTACATTTTTTGATA-------TA-----------ATTG 48888
| ||| | |||| ||| | | | || | || ||||
Sbjct 24556 TGACAATATTGTAGACAT-CATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTG 24614
Query 48889 A-TTCCTTGTAAAGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGA 48947
| | | ||||||||||| ||||| | | |||| |||| | |||| |||||| | |
Sbjct 24615 ACGTATCTATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAA 24674
Query 48948 TTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA 49007
||||| || | ||||| || |||| | || ||||||||||||| || || ||| ||
Sbjct 24675 TTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGT-CATATA 24733
Query 49008 CTAG-ATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCC 49066
| || |||| || ||||| | |||| ||| | || || |||||| ||| | ||
Sbjct 24734 AGCGCATGTTTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATAGACACC 24793
Query 49067 TTGAATAACTTTCATT--GCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAA 49124
||| | | | || | | || || | || ||||| | ||| | |||||
Sbjct 24794 AGAAATGA--TACGTTGGGTGACCTTAACGGCGTCGATATGTTTTGGATCTAAACCATAG 24851
Query 49125 CATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCA 49184
||||| | ||| | || ||||| ||||| || | | ||||||||||||||
Sbjct 24852 CATAAGCGTGATATACGAGCGGTAATCTTATCGAATTGGACAGGTTCTTTACGACCGTCT 24911
Query 49185 CGTTTTATAA 49194
| ||||||||
Sbjct 24912 C-TTTTATAA 24920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562104092338800
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