Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766245.2_202014-10-
12] 413 sequences; 11,644,991 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq174 244 9e-60
seq250 179 3e-40
seq161 176 4e-39
seq16 105 6e-18
seq182 98.7 9e-16
>seq174
Length=17031
Score = 244 bits (270), Expect = 9e-60
Identities = 417/600 (70%), Gaps = 6/600 (1%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
||| || || |||| |||||||| || ||||||||||| ||||| || | || ||
Sbjct 6892 TTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 6951
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| |||||||| ||| |||||| | | ||| | ||| || || | || ||||||||
Sbjct 6952 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCA 7011
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || ||||||| ||||||||| || ||||| ||||| || ||||| || || |||||
Sbjct 7012 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACG 7071
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
||| ||||| ||| | || | | ||| || | | |||||| || | ||| | ||
Sbjct 7072 GGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACC 7131
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | ||||| ||| |||| ||| || | || | ||| || || || | |
Sbjct 7132 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 7191
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
||| || |||| || |||| |||| |||||||| || |||||||| |||||| ||
Sbjct 7192 TTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTT 7251
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || ||||||||||| || |||||||| | ||| || ||| |||| ||||| ||
Sbjct 7252 CATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGT 7311
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| |||||| ||||| ||| ||||| | || ||||| || | || || ||
Sbjct 7312 TGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTC 7371
Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879
|| | |||| ||||| || || | ||||| | ||| || | | ||| || | |||
Sbjct 7372 GATAT-CTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGG 7430
Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| | ||| ||||| ||| | | | ||| ||||||| || |||||||| ||||||||
Sbjct 7431 CCACTTGA--CCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 7488
>seq250
Length=89310
Score = 179 bits (198), Expect = 3e-40
Identities = 426/641 (66%), Gaps = 2/641 (0%)
Strand=Plus/Minus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| ||| ||| |||| |||||||| || ||||||||||| ||||| || | || ||
Sbjct 60410 TTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACG 60351
Query 23401 CACCTCCTCTTTGCC-GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| || || || || ||||| ||| | | ||| | |||||| || | || |||||||
Sbjct 60350 AATTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCC 60292
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519
| ||||| | | ||| ||| || || || |||||||| || || ||||| || || ||||
Sbjct 60291 ATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAAC 60232
Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579
|||| || || ||| | || | | ||| || | | ||||| || | ||| |
Sbjct 60231 GGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTAC 60172
Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639
| || | | |||||| | | || | ||||| | || | ||| | || || | |
Sbjct 60171 CAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAG 60112
Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699
||| || ||||| || |||| ||||| ||| || || || || ||||| ||| || |
Sbjct 60111 TTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCT 60052
Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759
| | || | |||||||| ||||||||||| | | |||||| | || ||| | |
Sbjct 60051 TCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAG 59992
Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819
| ||| ||||| || ||||||| |||||| | ||| || || | | | | |
Sbjct 59991 TTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATT 59932
Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879
| || || || || ||||| | || || ||||| | || | ||||| | ||
Sbjct 59931 CGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTG 59872
Query 23880 CCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939
|| | ||||| | | | | || || ||||| | || || || ||||| |||||
Sbjct 59871 CCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACG 59812
Query 23940 CATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980
||| | || || | ||||| ||| |||||||| ||||||
Sbjct 59811 TATACTGGAAATCCCTATCGTACACGATGGCCGAGTTCAAA 59771
>seq161
Length=77021
Score = 176 bits (194), Expect = 4e-39
Identities = 547/835 (66%), Gaps = 19/835 (2%)
Strand=Plus/Minus
Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650
|| ||||| || || ||||||| |||||| | || ||||||||||| | || |||
Sbjct 62147 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGG 62088
Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707
| | | || ||| |||||| ||| ||| || | || |||||||||
Sbjct 62087 AACAACAGAATGAACGAAAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCC 62028
Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767
|| || || ||||||||||| || || ||||| |||| ||||| ||||| ||| |
Sbjct 62027 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTTTCCACCGAAGTCCAAATT 61968
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| ||||| | | || ||||| || ||| | |||||||| | || || ||||
Sbjct 61967 CCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACT 61908
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886
|| || | | |||||||| ||| | |||||| | || || | | | |||||||
Sbjct 61907 TACTCCTTGTTGATCGATACTTACATCAAGGACCCTAAAGA-AAGTGAATTCTTGTTCAA 61849
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
|| || | || || || | |||| ||||||| || ||| | | | |||||| |
Sbjct 61848 TGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCA 61789
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| ||| ||| ||| | || || ||| | || || ||| || | |||||| | ||
Sbjct 61788 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTT 61729
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
|| || || |||||| | || || ||| |||| || | || |||||||||| |
Sbjct 61728 TTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTT 61669
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
|| ||| |||||| ||||| | | ||||| ||| | || || || ||||| ||| |
Sbjct 61668 AACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 61609
Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTG--GACATTATCAC 58183
||| | | || | || ||||| ||| | | | | ||| | ||| ||||
Sbjct 61608 GTTGTTCGCCCATTTGAAGAACAAACCAGACCC---AGCCATTGTTGAAAAAATTGTCAC 61552
Query 58184 CGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242
|||||| || | || ||| || || | || || ||| |||| || || |||| |
Sbjct 61551 CGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCTTTGCTAG 61493
Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302
|||||||| ||| || ||| | ||| ||||||| || ||||||||||| ||| |||
Sbjct 61492 GTATGAACGCTGACTTAATGAACCAATACGTTGAGTTCGTCGCCGACAGACTGTTGGTCG 61433
Query 58303 AACTGATTGGAGAGCGTCATTACAACACG---AAAAATCCGTTTGATTTTATGAATCTGA 58359
|| | || | | ||| ||| | |||| || || ||||| ||| | |
Sbjct 61432 --CT-TTCGGTAACAAGAAATACTACAAGGTCGAAAACCCCTTCGATTTCATGGAAAACA 61376
Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
|||| | | || ||||| ||||| |||||||| | |||| || || |||||
Sbjct 61375 TCTCCTTGGCCGGTAAGACTAACTTCTTCGAAAAGAGAGTTTCTGACTACCAAAA 61321
>seq16
Length=26083
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 17061 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 17002
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || |||
Sbjct 17001 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 16942
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| || ||| || ||| ||
Sbjct 16941 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 16882
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||||| || |||| | ||| |||| || |||
Sbjct 16881 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 16831
>seq182
Length=49204
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || ||||| |||||||| || || || ||| | || |||||| | ||
Sbjct 32827 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 32886
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || || ||| ||||||||||| | || || ||||||
Sbjct 32887 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 32946
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || || || | ||||| || || || || || ||
Sbjct 32947 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 33006
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || |||||||| || || | || ||||||| ||||
Sbjct 33007 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTA 33055
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||| |||| || ||||| || || | || |||||| | |||
Sbjct 32028 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 32087
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || || ||| ||||||||||| | || || || ||
Sbjct 32088 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 32147
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || || ||| | |||||| || || || ||||| |||
Sbjct 32148 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 32207
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || || | ||||| || || || || || || ||||
Sbjct 32208 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 32256
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||| |||| || ||||| ||||| | || |||||| | |||
Sbjct 32256 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 32315
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || ||| |||||||||||| | || || || ||
Sbjct 32316 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 32375
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || || ||| | |||||| || || || || || |||
Sbjct 32376 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 32435
Query 31373 ATTCAAAAAGAATC 31386
|| ||||| |||||
Sbjct 32436 ATCCAAAAGGAATC 32449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764098730960
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