Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766245.2_202014-10-
12] 413 sequences; 11,644,991 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq182 91.5 2e-13
>seq182
Length=49204
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||||| | | ||| | ||| || ||| |||||| ||||| ||||||||||
Sbjct 32255 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 32196
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| |||||||||||||| || || || | || || || || | ||
Sbjct 32195 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 32136
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | || ||| ||||| |
Sbjct 32135 GATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAA 32077
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || |||||||| || || | ||||| || || || |||||
Sbjct 32076 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32028
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|||||||| || ||||| |||| || || | |||| |||||||||||||| || ||
Sbjct 32446 TCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAG 32387
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | | ||| || || | || | | ||||||||| |||||| || | |
Sbjct 32386 ATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTA 32327
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||| ||||| || || | ||||||||||| || || | ||||| |||
Sbjct 32326 TCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACA 32267
Query 42198 AAGATTTGCAT 42208
||||| |||||
Sbjct 32266 AAGATCTGCAT 32256
Score = 86.0 bits (94), Expect = 7e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || || | ||| || | || | ||| |||||||||||||||||| || |
Sbjct 33054 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 32995
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | | || ||||| |||||||| || || || | || |||||||| | ||
Sbjct 32994 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 32935
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | ||||| ||||| |
Sbjct 32934 AATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 32876
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || || || ||||| ||||| ||||||||
Sbjct 32875 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 32827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543209995663920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |