Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766245.2_202014-10-
12] 413 sequences; 11,644,991 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq182 111 1e-19
seq16 100 2e-16
>seq182
Length=49204
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||| | ||| | ||| |||||| |||||||| ||||| ||
Sbjct 32254 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 32195
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| || || ||||||||||| || || | ||||| || || ||
Sbjct 32194 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 32135
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | |||||| | || || || || ||
Sbjct 32134 ATACCTTCCTTGTCT-TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 32076
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct 32075 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32028
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| |||||| |||||||||||| || || || || || |||| | ||||| |||||
Sbjct 33029 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGC 32970
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||||||||| || || | || ||||| || || | || ||||||||| ||| |||
Sbjct 32969 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCT-TGAATTTT 32911
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| |||||| | ||| ||||| || || || | |||||| || ||||| ||
Sbjct 32910 CGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 32851
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || || |||||||| |||||
Sbjct 32850 CAGTGTCTTGACAAAAATTTGCAT 32827
Score = 98.7 bits (108), Expect = 6e-16
Identities = 115/154 (75%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | |||||||||||| | || ||| || |||||||||||||| ||
Sbjct 32738 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 32679
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| ||||||||||| || || | ||||| || || ||
Sbjct 32678 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 32619
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG 34633
| || ||||||||| ||| ||| |||| |||
Sbjct 32618 ATACCTTCCTTGTCT-TGAATTTTACTTTTGACG 32586
Score = 96.9 bits (106), Expect = 2e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|||||||| ||||| || || || | |||| ||||||| || || |||||||||||
Sbjct 32446 TCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAG 32387
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| || | |||||| || || || | || |||||||| ||| ||| | |||||| |
Sbjct 32386 ATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGAT-TTTCGACTTAACGTT 32328
Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
| || ||||| | || || || | || || ||||||||||| || || || ||
Sbjct 32327 ATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAAC 32268
Query 34695 AAAAATCTGCAT 34706
||| ||||||||
Sbjct 32267 AAAGATCTGCAT 32256
>seq16
Length=26083
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || ||||| |||||||| ||||| || || ||
Sbjct 16832 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 16891
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 16892 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 16951
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||||| | || || | ||| ||||| || ||
Sbjct 16952 ATACCTTCCTTGTCTTGGATCTTG-GACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 17010
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| ||| || || ||||||||||| || || || ||||| ||||| |||
Sbjct 17011 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 17062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728015828229
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |