Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766265.2_202014-10- 12] 451 sequences; 11,617,205 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq175 244 9e-60 seq240 179 3e-40 seq334 176 4e-39 seq245 84.2 2e-11 >seq175 Length=144935 Score = 244 bits (270), Expect = 9e-60 Identities = 417/600 (70%), Gaps = 6/600 (1%) Strand=Plus/Minus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 ||| || || |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 10143 TTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 10084 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | |||||||| ||| |||||| | | ||| | ||| || || | || |||||||| Sbjct 10083 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 10024 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || ||||||| ||||||||| || ||||| ||||| || ||||| || || ||||| Sbjct 10023 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACG 9964 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||| ||| | || | | ||| || | | |||||| || | ||| | || Sbjct 9963 GGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACC 9904 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | ||||| ||| |||| ||| || | || | ||| || || || | | Sbjct 9903 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 9844 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 ||| || |||| || |||| |||| |||||||| || |||||||| |||||| || Sbjct 9843 TTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTT 9784 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || ||||||||||| || |||||||| | ||| || ||| |||| ||||| || Sbjct 9783 CATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGT 9724 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || |||||| ||||| ||| ||||| | || ||||| || | || || || Sbjct 9723 TGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTC 9664 Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 || | |||| ||||| || || | ||||| | ||| || | | ||| || | ||| Sbjct 9663 GATAT-CTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGG 9605 Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | ||| ||||| ||| | | | ||| ||||||| || |||||||| |||||||| Sbjct 9604 CCACTTGA--CCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 9547 >seq240 Length=47138 Score = 179 bits (198), Expect = 3e-40 Identities = 426/641 (66%), Gaps = 2/641 (0%) Strand=Plus/Plus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || ||| ||| |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 42848 TTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACG 42907 Query 23401 CACCTCCTCTTTGCC-GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | || || || || ||||| ||| | | ||| | |||||| || | || ||||||| Sbjct 42908 AATTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCC 42966 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| | | ||| ||| || || || |||||||| || || ||||| || || |||| Sbjct 42967 ATGGCTCCAAGAAAAGGGCGAAGGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAAC 43026 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 |||| || || ||| | || | | ||| || | | ||||| || | ||| | Sbjct 43027 GGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTAC 43086 Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639 | || | | |||||| | | || | ||||| | || | ||| | || || | | Sbjct 43087 CAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAG 43146 Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 ||| || ||||| || |||| ||||| ||| || || || || ||||| ||| || | Sbjct 43147 TTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCT 43206 Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759 | | || | |||||||| ||||||||||| | | |||||| | || ||| | | Sbjct 43207 TCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAG 43266 Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819 | ||| ||||| || ||||||| |||||| | ||| || || | | | | | Sbjct 43267 TTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATT 43326 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 | || || || || ||||| | || || ||||| | || | ||||| | || Sbjct 43327 CGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTG 43386 Query 23880 CCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 || | ||||| | | | | || || ||||| | || || || ||||| ||||| Sbjct 43387 CCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACG 43446 Query 23940 CATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980 ||| | || || | ||||| ||| |||||||| |||||| Sbjct 43447 TATACTGGAAATCCCTATCGTACACGATGGCCGAGTTCAAA 43487 >seq334 Length=60422 Score = 176 bits (194), Expect = 4e-39 Identities = 547/835 (66%), Gaps = 19/835 (2%) Strand=Plus/Minus Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650 || ||||| || || ||||||| |||||| | || ||||||||||| | || ||| Sbjct 23314 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGG 23255 Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707 | | | || ||| |||||| ||| ||| || | || ||||||||| Sbjct 23254 AACAACAGAATGAACGAAAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCC 23195 Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767 || || || ||||||||||| || || ||||| |||| ||||| ||||| ||| | Sbjct 23194 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTTTCCACCGAAGTCCAAATT 23135 Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 | ||||| | | || ||||| || ||| | |||||||| | || || |||| Sbjct 23134 CCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACT 23075 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886 || || | | |||||||| ||| | |||||| | || || | | | ||||||| Sbjct 23074 TACTCCTTGTTGATCGATACTTACATCAAGGACCCTAAAGA-AAGTGAATTCTTGTTCAA 23016 Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946 || || | || || || | |||| ||||||| || ||| | | | |||||| | Sbjct 23015 TGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCA 22956 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 | ||| ||| ||| | || || ||| | || || ||| || | |||||| | || Sbjct 22955 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTT 22896 Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066 || || || |||||| | || || ||| |||| || | || |||||||||| | Sbjct 22895 TTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTT 22836 Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 || ||| |||||| ||||| | | ||||| ||| | || || || ||||| ||| | Sbjct 22835 AACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 22776 Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTG--GACATTATCAC 58183 ||| | | || | || ||||| ||| | | | | ||| | ||| |||| Sbjct 22775 GTTGTTCGCCCATTTGAAGAACAAACCAGACCC---AGCCATTGTTGAAAAAATTGTCAC 22719 Query 58184 CGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242 |||||| || | || ||| || || | || || ||| |||| || || |||| | Sbjct 22718 CGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCTTTGCTAG 22660 Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302 |||||||| ||| || ||| | ||| ||||||| || ||||||||||| ||| ||| Sbjct 22659 GTATGAACGCTGACTTAATGAACCAATACGTTGAGTTCGTCGCCGACAGACTGTTGGTCG 22600 Query 58303 AACTGATTGGAGAGCGTCATTACAACACG---AAAAATCCGTTTGATTTTATGAATCTGA 58359 || | || | | ||| ||| | |||| || || ||||| ||| | | Sbjct 22599 --CT-TTCGGTAACAAGAAATACTACAAGGTCGAAAACCCCTTCGATTTCATGGAAAACA 22543 Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||| | | || ||||| ||||| |||||||| | |||| || || ||||| Sbjct 22542 TCTCCTTGGCCGGTAAGACTAACTTCTTCGAAAAGAGAGTTTCTGACTACCAAAA 22488 >seq245 Length=81824 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || ||||| ||||| | || |||||| | ||| Sbjct 51887 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 51828 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || ||| |||||||||||| | || || || || Sbjct 51827 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 51768 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || ||| | |||||| || || || || || ||| Sbjct 51767 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 51708 Query 31373 ATTCAAAAAGAATC 31386 || ||||| ||||| Sbjct 51707 ATCCAAAAGGAATC 51694 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| || ||||| || || | || |||||| | ||| Sbjct 52115 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 52056 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || ||| ||||||||||| | || || || || Sbjct 52055 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 51996 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || ||| | |||||| | || || ||||| ||| Sbjct 51995 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGCAGAACGCTGTCTGATTACAAC 51936 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || | ||||| || || || || || || |||| Sbjct 51935 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 51887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763886991920