Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766265.2_202014-10- 12] 451 sequences; 11,617,205 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq245 118 8e-22 >seq245 Length=81824 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | |||| || | ||| | |||||| || || || ||||||||||| Sbjct 51889 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 51948 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| ||||||||| || || || || | ||||| | |||||| || || Sbjct 51949 AGCGTTCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 52008 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| |||||| ||| || | || ||||||||| | ||| || Sbjct 52009 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 52068 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||||||||| |||| ||| || || ||||| |||||| Sbjct 52069 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 52116 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 15170 GAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCG 15229 || || ||||| |||||||| || | |||| | ||||||| ||| || ||||| Sbjct 51246 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCA 51305 Query 15230 TATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACA 15289 | ||||| | ||||| || || || |||||||| || |||||| || || || Sbjct 51306 AAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACG 51365 Query 15290 ATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTT 15349 | || || || ||| | ||| || |||| ||| || || || ||||| |||||||| Sbjct 51366 TTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTG 51425 Query 15350 ACAAAAATTTGCATA 15364 || |||||||||||| Sbjct 51426 ACGAAAATTTGCATA 51440 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || ||||| | || || ||||| || ||||| ||||| Sbjct 51441 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51500 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| ||||||| | ||| || || || | ||||| | |||||| || ||| Sbjct 51501 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 51560 Query 15257 ATTCCTTCTTTGTCACAAATTTT 15279 || ||||| ||||| |||||| Sbjct 51561 ATACCTTCCTTGTCTTGAATTTT 51583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362177209259391