Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766265.2_202014-10- 12] 451 sequences; 11,617,205 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq334 125 8e-24 >seq334 Length=60422 Score = 125 bits (138), Expect = 8e-24 Identities = 128/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 |||| ||| |||||||| || ||||||||||| || |||| || ||||| || ||| Sbjct 22770 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 22829 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586 || |||||||||||||| | ||||||||||| ||||| || || || ||||| | || Sbjct 22830 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 22889 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACC 21633 || || || | || |||| || ||||| ||||||| || |||||| Sbjct 22890 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACC 22936 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/227 (69%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAAC 21833 ||||||| || |||||||| ||| || || || ||||| |||| ||||||||| | Sbjct 23077 TTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAA 23136 Query 21834 ATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGG 21893 ||| || |||| |||| || | ||||||||||||| || || || ||| |||| Sbjct 23137 TTTGGACTTCGGTGGAAAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGG 23196 Query 21894 CAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTC 21949 | ||||| || | | | || ||| ||| ||||| || ||| || || ||| Sbjct 23197 CGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTTTC-GTTCATTCTGTTGTTC 23255 Query 21950 CAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 || || | ||| || || ||||| | |||||||| ||||| || Sbjct 23256 CAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 23302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531897801409240