Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766265.2_202014-10- 12] 451 sequences; 11,617,205 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq245 170 3e-37 >seq245 Length=81824 Score = 170 bits (188), Expect = 3e-37 Identities = 147/182 (81%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || ||||| || || |||||| ||| |||| ||| || || |||||||| |||||| Sbjct 51258 ATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTC 51317 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| ||||| || |||||||||||||| ||||| |||| | || |||||| Sbjct 51318 TGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTG 51377 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 |||||||| ||||| ||||| |||||||| || |||||||| ||||| || || |||||| Sbjct 51378 TCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGC 51437 Query 193359 AT 193360 || Sbjct 51438 AT 51439 Score = 138 bits (152), Expect = 2e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| || Sbjct 51431 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 51490 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||||| || || | ||| || |||||||| || ||||| ||||| Sbjct 51491 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTG 51550 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| ||||| | || | || |||||| || || Sbjct 51551 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGA 51610 Query 193304 AGACTCAACTTCTA 193317 ||| ||||| |||| Sbjct 51611 AGATTCAACCTCTA 51624 Score = 132 bits (146), Expect = 9e-26 Identities = 177/245 (72%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | | || || ||||| || || | ||| || ||| || || || Sbjct 51886 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 51945 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||||| || |||| || || |||||||| || ||||| |||||||| ||| Sbjct 51946 GACAGCGTTCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 52005 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | || | || || ||||||||||| ||| Sbjct 52006 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 52065 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368 ||||| | ||||| |||||||| || | || || || || || ||||| | |||||| Sbjct 52066 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 52125 Query 193369 TAAAA 193373 | ||| Sbjct 52126 TTAAA 52130 Score = 107 bits (118), Expect = 3e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || ||||| || || |||||| || |||| || || |||||||| || || ||| Sbjct 51706 ATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTC 51765 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| ||||| || ||||| || || || ||||| | || | || || || Sbjct 51766 TGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTG 51825 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| || ||||| |||| ||| || |||||||| || | || || ||||| || ||| Sbjct 51826 TCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGC 51885 Query 193359 AT 193360 || Sbjct 51886 AT 51887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899649328198320