Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766265.2_202014-10- 12] 451 sequences; 11,617,205 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq245 122 2e-22 seq334 116 7e-21 >seq245 Length=81824 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | ||| |||||||||||||| ||||||||||| || || || || ||||||||| Sbjct 51285 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 51344 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| |||||| |||| || || ||||| || || ||||| || ||||| || || Sbjct 51345 TCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATA 51404 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || |||| ||||| | ||| || ||||| Sbjct 51405 GTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 51439 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || | || || | |||||| || | ||| || ||| || ||||| Sbjct 51886 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 51945 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | || ||||| ||||| || ||||| ||||| || || Sbjct 51946 GACAGCGTTCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 52005 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| || || || || ||||| || ||||| Sbjct 52006 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 52065 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || ||||||||||| || || || || | ||| |||||||| Sbjct 52066 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 52115 Score = 107 bits (118), Expect = 3e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || ||||| || |||| |||||| ||| |||||||| Sbjct 51438 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 51497 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| |||| ||| ||||| ||||| || ||||| ||||| || || Sbjct 51498 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 51557 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| || || || ||||| || || ||||| Sbjct 51558 GGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 51617 Query 172020 ACTTCTA 172026 || |||| Sbjct 51618 ACCTCTA 51624 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| || | || ||||| ||||| || || |||||||| || || || || ||||| | Sbjct 51731 CGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCT 51790 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | || || ||||| || || ||| || || || || ||||| || |||| ||| | Sbjct 51791 TGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGA 51850 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||||| || || || |||| || |||||||| Sbjct 51851 TGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 51887 >seq334 Length=60422 Score = 116 bits (128), Expect = 7e-21 Identities = 334/505 (66%), Gaps = 13/505 (3%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| ||||||||| | |||||||| ||||| || || || | || || || Sbjct 22488 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 22547 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AA 38950 | ||| ||||| || || |||| | || || ||||| | | || | | | | || Sbjct 22548 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT-TGTTACCGAAAGCGACCAA 22606 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 | ||| ||||| || || ||||| ||||| |||||| ||| |||||||| | || Sbjct 22607 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 22666 Query 39011 TTTAAATGGTAATGCATCATCAATAAAT-TCttt-ttctatttctacagcttgtttaatt 39068 || |||||| || || ||| || | ||||| ||| ||||| ||||| | | | Sbjct 22667 AGCAACTGGTAAGGCGTC--CAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 22724 Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126 || | || | || | | | ||| | || | ||| || | | || | Sbjct 22725 ATTTT--TTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGG---GCGAACAACAAGC 22779 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 ||||||| || || || ||||||||||| ||| | || ||||| || ||| ||||| | Sbjct 22780 ATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAAC 22839 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 | ||||| | ||||||||||| | ||| || || || ||||| || || || || | Sbjct 22840 CGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGA 22899 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 ||| || | | ||||| || | || |||| | ||||||| | | | ||| || Sbjct 22900 CACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAA 22959 Query 39307 TCCAATTTATGGCCCAATCTGCTTT 39331 |||| ||| ||||| || || || Sbjct 22960 TCCATCTTAAAGCCCATTCGGCCTT 22984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905130897295800