Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766265.2_202014-10-
12] 451 sequences; 11,617,205 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq245 113 3e-20
>seq245
Length=81824
Score = 113 bits (124), Expect = 3e-20
Identities = 166/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| || || | |||||||| || |
Sbjct 52115 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 52056
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || || |||| | |||| || ||||| |||||| | || ||||||||
Sbjct 52055 GATACCATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATCCCTCCAGATCA 51997
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATT 23785
||| | || || |||||||| || || || ||||||| ||||| | | ||||
Sbjct 51996 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGCAGAACGCTGTCT----GATT 51941
Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||||| || || |||||||| |||||| | || ||||| | |||| ||
Sbjct 51940 ACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 51889
Score = 104 bits (114), Expect = 2e-17
Identities = 137/187 (73%), Gaps = 10/187 (5%)
Strand=Plus/Minus
Query 23656 GAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGG 23714
|| ||||| || | |||||| |||| || |||| | |||| || ||||| |||||
Sbjct 51622 GAGGTTGAATCTTCTGACACTATTGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGG 51564
Query 23715 TGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC----GAAC 23770
| | || ||||||||||| | || || |||||||| || |||||||||||| ||||
Sbjct 51563 TATTCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAAC 51504
Query 23771 GCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGC 23830
|| | | ||||| ||||| || |||||||| || || ||||| || || || |||
Sbjct 51503 GCTGTCT----GATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGA 51448
Query 23831 GAGGAGG 23837
|||| ||
Sbjct 51447 GAGGTGG 51441
Score = 102 bits (112), Expect = 6e-17
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||| || | || || ||||| |||||| | || ||||| ||| |
Sbjct 51887 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 51828
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || |||| | |||| | ||||| |||||| | || ||||||||
Sbjct 51827 GACACGATCGATAACGTTAAGTCGAAAA-TCCAGGACAAGGAAGGTATCCCTCCAGATCA 51769
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | || || |||||||| || || || ||||||| | || || || |||||
Sbjct 51768 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 51709
Query 23790 CATACAAAAAGAGTC 23804
||| ||||| || ||
Sbjct 51708 CATCCAAAAGGAATC 51694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007742109108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |