Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766275.2_202014-10- 12] 624 sequences; 11,617,669 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq30 118 9e-22 seq469 104 2e-17 seq425 84.2 2e-11 >seq30 Length=22784 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| |||| || || || || || || |||||| ||| ||| | Sbjct 14128 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 14069 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | | || ||||| || || || || |||||| | || || Sbjct 14068 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 14009 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 ||||||||| | |||||||| || || |||||||||||| | |||| || |||| ||| Sbjct 14008 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 13949 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || ||||||||||||||||| ||| |||| || |||| |||| || Sbjct 13948 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 13899 >seq469 Length=29044 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| ||||||| | || || || || || ||| || ||| | | Sbjct 12418 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 12477 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | |||| |||||| |||||||||||| | || |||||| Sbjct 12478 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 12537 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||| | || ||||| || || ||| | |||||| | ||| || | || ||||| Sbjct 12538 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 12597 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||||||||||||| ||||||| |||| |||| || Sbjct 12598 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 12644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| ||| |||| || || || || ||| || ||| | | Sbjct 12646 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 12705 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | | ||| |||||| || || |||||| | || ||| || Sbjct 12706 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 12765 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | |||||||| || |||||| | |||||| | ||| || | || |||||| Sbjct 12766 CAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 12825 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||||||||||| || ||||||||| | || || Sbjct 12826 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTT 12857 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | || || ||||| || |||||||| || || ||| || | Sbjct 11962 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 12021 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||| ||||| || || |||||| | || ||||||| Sbjct 12022 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 12081 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || | |||||||| || || || | ||||| | ||| || | || ||||| Sbjct 12082 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 12141 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||||||||||||| ||||||| |||| |||| || Sbjct 12142 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 12188 >seq425 Length=53758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107 |||| || ||||| || || ||||| || ||| ||| | | || || | | | Sbjct 36192 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 36133 Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || ||||| ||| ||| || || |||||| | || || ||||||||| | |||| Sbjct 36132 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 36073 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| || || ||||||||||| | ||| || | || ||||| |||||||| |||| Sbjct 36072 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAAT 36013 Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | ||| | ||| | || || |||| |||| || Sbjct 36012 CCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 35979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410793675890336