Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766275.2_202014-10- 12] 624 sequences; 11,617,669 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq486 116 6e-22 seq517 111 2e-20 >seq486 Length=32700 Score = 116 bits (128), Expect = 6e-22 Identities = 188/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 25597 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 25539 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 25538 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 25479 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| |||| | | |||| ||| || || | || ||||| Sbjct 25478 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 25419 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 25418 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 25359 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 25358 TAGAACCTTATATGGTTTCGGTGGTTAA 25331 Score = 84.2 bits (92), Expect = 3e-12 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 25783 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 25725 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 25724 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 25665 Query 16552 TCGTGATGTTTTGAA 16566 | | ||| ||||| Sbjct 25664 CAGAGCTGTCTTGAA 25650 >seq517 Length=67496 Score = 111 bits (122), Expect = 2e-20 Identities = 170/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 28891 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 28833 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 28832 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 28773 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| |||| | | |||| ||| || || | || ||||| Sbjct 28772 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 28713 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 28712 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 28653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074629472432