Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766275.2_202014-10- 12] 624 sequences; 11,617,669 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq521 111 2e-19 seq469 98.7 1e-15 >seq521 Length=39069 Score = 111 bits (122), Expect = 2e-19 Identities = 524/818 (64%), Gaps = 27/818 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT- 132683 || || || || ||||| || || ||||||| ||| ||| ||||| |||||||| Sbjct 111 TTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT 170 Query 132684 --GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||| ||| | |||| | |||| || |||| | ||| |||||||| |||||| Sbjct 171 TCGACCTTGTAGTATTTCTTGTTACCGAA-AG--CGACCAACAGTCTGTCGGCGACGAAC 227 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801 || | |||||| ||| || || | || |||| | || || | || || Sbjct 228 TCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC 287 Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861 || | | ||| || || | || || |||||||| |||| ||| || | | Sbjct 288 AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGG 347 Query 132862 -CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 || | ||| | |||||| ||||| |||||| ||||||||| ||||| || || Sbjct 348 TCTGGTTTGTT-CTTCAAATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTC 406 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| || | || | ||||||| || || || |||||||| | || | ||||| | Sbjct 407 GTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAA 466 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| ||| || || || || ||||| || || | || || || || || Sbjct 467 CCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAAC 526 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 || | || || ||| ||| || | || | ||||| | | ||||||||||||| Sbjct 527 TAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCT 585 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTT---TCTCTTCCG 133156 | || || || || || | ||||| || ||||| || || | |||| | Sbjct 586 TCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAA---GAATTCACTTTCTTTAG 642 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 | | ||| || ||||| | || || |||| ||||| | || || || Sbjct 643 GGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCA 702 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACG-- 133274 |||||| || ||||| || | | ||||| | || ||||| | |||| | Sbjct 703 TGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTC--GGTGGAAAAGTT 760 Query 133275 CTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTT 133334 || |||| ||||| || || || ||||| |||||||||||||| || || || Sbjct 761 TTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAAC--TCTG 818 Query 133335 G--ATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGAC 133389 | |||||| | |||||| ||||||| | | |||||| | | ||||| ||| Sbjct 819 GAAATGAAAAATCTCTCGTTTTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGAC 878 Query 133390 AGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 | || | || || ||||||| || || || ||||| Sbjct 879 AAATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 916 >seq469 Length=29044 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || ||||||||||| | || || || || || Sbjct 11962 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 12021 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| ||||||| ||||| || || || || | || || Sbjct 12022 GACACGATCGATAACG-TTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 12080 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| || | || | || || || ||||| || |||| | ||| | |||||||| Sbjct 12081 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 12140 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 12141 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 12188 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || || || || ||| | || || || | || Sbjct 12418 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 12477 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| |||| || || ||||| || || || | || || Sbjct 12478 GACACTATTGACAACGTCAAAAGTAAAATTCAA-GATAAAGAAGGTATCCCTCCGGATCA 12536 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | |||| || || || || || || || | | ||| | |||||||| Sbjct 12537 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 12596 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| || | |||||||| || Sbjct 12597 CATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 12644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168898652160