Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766275.2_202014-10-
12] 624 sequences; 11,617,669 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq142 122 2e-22
seq282 107 5e-18
seq528 95.1 3e-14
>seq142
Length=66945
Score = 122 bits (134), Expect = 2e-22
Identities = 397/608 (65%), Gaps = 9/608 (1%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||| || ||||| || || || ||| | || || || | | || || || |
Sbjct 58272 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 58331
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||||||||| || || | | ||||| ||| | ||||| ||||| ||||| ||
Sbjct 58332 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 58391
Query 110424 GCTGTTATTGAATG-TTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481
|||| | |||| |||| || | || || || | | | | ||| ||| | || |
Sbjct 58392 TCTGT-ACTGAAGACTTATAATTTGATGTCGTTAAGATACTTC-ACTCACGCTTCCCCAA 58449
Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATT 110540
| |||| ||||| || || ||| || |||| || |||||| | | ||
Sbjct 58450 CTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATG 58508
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| ||||| ||||| ||||||||||||||| || | |||||| |||| | ||||| |||
Sbjct 58509 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 58568
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| | || || ||||| |||| | | | || || || | ||| | |||||||
Sbjct 58569 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATATCGCT 58628
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| || ||| |||||| || | |||| ||| | | || ||||| | |||||
Sbjct 58629 GGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGCC 58688
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
|||||| | || |||||| |||||| ||| | || || | | | || ||
Sbjct 58689 CGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAGCCA 58748
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
|||||| ||||||| || || || | || | | |||| || || ||||||
Sbjct 58749 TGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGAAATT 58808
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897
| ||| | ||||| || ||| | ||||| | ||| | ||||||||||||||||||
Sbjct 58809 CGTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGTTCAA 58868
Query 110898 GAAAATGG 110905
|| ||||
Sbjct 58869 GAGGATGG 58876
>seq282
Length=17304
Score = 107 bits (118), Expect = 5e-18
Identities = 251/374 (67%), Gaps = 13/374 (3%)
Strand=Plus/Minus
Query 167614 TTGCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAAC 167673
|||| || | | || ||| | ||| || || | ||| ||||||| | ||| |||||
Sbjct 16269 TTGCTGCTAATGGCAAAGTATTAAATACGTCAACGAACATTTTCCATACTTT---CGAAC 16213
Query 167674 -CA--CGTCGTTTGCATTCATCGTAAAAACCATA-GTCTCTTGAGATATCAGCACATTCG 167729
|| || | |||||||||||| || ||||| || ||| ||| || || |||| |||||
Sbjct 16212 TCAATCGCCTTTTGCATTCATCATAGAAACCGTACATCT-TTGTGACATTAGCAGATTCG 16154
Query 167730 TGATTTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAATAAC 167789
||||| || ||||| | || | ||| | | |||| || ||||| ||
Sbjct 16153 TGATTACCCCTTAACATAAAAAAGTTGTCTTTGTACTTTATTTTGTAACATAATAACAAT 16094
Query 167790 AAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCTAAAAATATATATTTA 167849
| |||||||| ||||| || ||| | || ||||||||||| || || | ||| |||
Sbjct 16093 AGTATTGTTTCCAATGAGTTCTTACCACGGTCCACATAATCACCCAAGAACAGATAATTA 16034
Query 167850 TTTTGGTTTGAAGGATTATCTAGTTTTTTAAAAATATTCAATAAATCACTAAATTGACCA 167909
| | || || | | || ||||| ||||||||||| ||||||| |||
Sbjct 16033 GT---ATCAGATGGCACACCAGACAACTTCAAAATTCTCAATAAATCATTAAATTGTCCA 15977
Query 167910 TGTAAATCACCTACAACCTTTAT-GGGACTTGTAGTTTTAATTAGCATTGGTTCGCTCAT 167968
|| | |||||| ||||| || || || |||||| | | || || | |||| |||
Sbjct 15976 TGAACATCACCGACAACTTTGATAGGCGCTTGTAATCTCAA-AAGAGTAGGTTGATTCAA 15918
Query 167969 AAATATTGTTCTTG 167982
||| ||| |||||
Sbjct 15917 AAAAATTTCTCTTG 15904
>seq528
Length=41138
Score = 95.1 bits (104), Expect = 3e-14
Identities = 127/175 (73%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | || ||
Sbjct 1520 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGCTC 1577
Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003
||||| || ||| | || | || |||| | || | || |||||||||||||
Sbjct 1578 TTCAAAAGTCCGGCCGTCCCGTTAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGTC 1637
Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAAT 305058
|||| |||||||| ||||||| || ||||| |||||| ||||||| ||| ||
Sbjct 1638 GTATCAGAGGTAATTTAATGGGTAAGCGTGTGGATTTTTCGGCAAGAACTGTTAT 1692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186803311431664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |