Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766275.2_202014-10- 12] 624 sequences; 11,617,669 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq592 298 7e-76 >seq592 Length=15778 Score = 298 bits (330), Expect = 7e-76 Identities = 910/1389 (66%), Gaps = 42/1389 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 4781 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 4840 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 4841 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 4898 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 4899 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 4957 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 || | ||||| || || ||||| || | || ||||| || | ||| | |||| | Sbjct 4958 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 5015 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | |||||| || |||| ||| || ||||| || ||||||||||| | ||| Sbjct 5016 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 5075 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | | |||||| || |||||||||| | || ||| || || || |||||| Sbjct 5076 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 5135 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 ||||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| Sbjct 5136 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 5195 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || |||| | |||||||||| ||||| ||| ||||||| || | |||||| Sbjct 5196 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 5255 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226 || | ||||| | | | ||| ||||| |||| ||| || | Sbjct 5256 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 5314 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || Sbjct 5315 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCTGTTTCATCTGGAGCTGAGTATTCA 5372 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| |||||||| || ||| || || || || ||||| ||| || Sbjct 5373 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 5432 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 |||| || ||||||||||| | | | | || || || || || || || | || | | Sbjct 5433 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 5492 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | | ||| | || || | | || | || | || || || |||||| Sbjct 5493 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 5549 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525 || || || || |||||||| ||||| ||| | ||| || || ||| Sbjct 5550 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 5608 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | | ||| ||| ||| || || |||||||||||||| || ||||| Sbjct 5609 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 5668 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 5669 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 5727 Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC-- 111702 |||| || || | |||||| || |||||||| || || || | || | | || Sbjct 5728 TATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 5787 Query 111703 --CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 |||| | ||| | || | ||||| || || ||| || || || |||| ||| Sbjct 5788 GTCTTT-TATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACGAATCATA 5846 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820 ||||| | ||| | || ||| ||||| || ||| ||| | | | | | Sbjct 5847 GGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATG 5906 Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 | |||||| || | |||||||| ||||| || || || ||||| ||| | | Sbjct 5907 TTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAG 5966 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || | || || || | ||| ||||||||||| |||| | | ||| ||| |||||| Sbjct 5967 GTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATT 6026 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-G 111999 || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | Sbjct 6027 TGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAG 6085 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || || || || || ||| || || ||| ||||||||||| | ||| Sbjct 6086 AGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGC 6145 Query 112060 GACCCGCAT 112068 ||| | ||| Sbjct 6146 GACTCTCAT 6154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027101350400