Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766305.2_202014-10- 12] 577 sequences; 11,844,220 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq350 96.9 4e-15 >seq350 Length=48333 Score = 96.9 bits (106), Expect = 4e-15 Identities = 281/432 (65%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || || |||||| || | ||||||||||| | ||| | |||||||||||| ||||| Sbjct 25426 CATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAA 25367 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| | |||| || || |||||||| || | ||||| || || || || || Sbjct 25366 CCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAG 25307 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 | ||| |||| || ||||| || | || || ||| | || || || | || Sbjct 25306 ACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA 25247 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTT----GTTTTATACAATCCATCGTTTCTATGGC 16437 |||||| | |||||||||| || | | ||| | || || | ||||| Sbjct 25246 ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCT----GGGATGGTGTGAATGGC 25191 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 || ||||| || |||| | | || | || || ||||| |||| || ||| Sbjct 25190 ATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTA 25131 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| ||||| || || || || || || || || ||||| | ||||| | Sbjct 25130 AGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGG 25071 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||||| ||||| | | || ||| ||| ||| ||||| || ||||||||| || Sbjct 25070 AATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 25011 Query 16618 AGCAAAAAACGC 16629 || ||||| || Sbjct 25010 GGCGAAAAAGGC 24999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410711423640