Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766305.2_202014-10- 12] 577 sequences; 11,844,220 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq503 244 9e-60 seq155 179 3e-40 seq350 165 7e-36 seq351 89.7 5e-13 >seq503 Length=76639 Score = 244 bits (270), Expect = 9e-60 Identities = 417/600 (70%), Gaps = 6/600 (1%) Strand=Plus/Plus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 ||| || || |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 53955 TTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 54014 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | |||||||| ||| |||||| | | ||| | ||| || || | || |||||||| Sbjct 54015 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 54074 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || ||||||| ||||||||| || ||||| ||||| || ||||| || || ||||| Sbjct 54075 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACG 54134 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||| ||| | || | | ||| || | | |||||| || | ||| | || Sbjct 54135 GGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACC 54194 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | ||||| ||| |||| ||| || | || | ||| || || || | | Sbjct 54195 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 54254 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 ||| || |||| || |||| |||| |||||||| || |||||||| |||||| || Sbjct 54255 TTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTT 54314 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || ||||||||||| || |||||||| | ||| || ||| |||| ||||| || Sbjct 54315 CATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGT 54374 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || |||||| ||||| ||| ||||| | || ||||| || | || || || Sbjct 54375 TGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTC 54434 Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 || | |||| ||||| || || | ||||| | ||| || | | ||| || | ||| Sbjct 54435 GATAT-CTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGG 54493 Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | ||| ||||| ||| | | | ||| ||||||| || |||||||| |||||||| Sbjct 54494 CCACTTGA--CCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 54551 >seq155 Length=12035 Score = 179 bits (198), Expect = 3e-40 Identities = 426/641 (66%), Gaps = 2/641 (0%) Strand=Plus/Plus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || ||| ||| |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 5544 TTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACG 5603 Query 23401 CACCTCCTCTTTGCC-GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | || || || || ||||| ||| | | ||| | |||||| || | || ||||||| Sbjct 5604 AATTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCC 5662 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| | | ||| ||| || || || |||||||| || || ||||| || || |||| Sbjct 5663 ATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAAC 5722 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 |||| || || ||| | || | | ||| || | | ||||| || | ||| | Sbjct 5723 GGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTAC 5782 Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639 | || | | |||||| | | || | ||||| | || | ||| | || || | | Sbjct 5783 CAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAG 5842 Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 ||| || ||||| || |||| ||||| ||| || || || || ||||| ||| || | Sbjct 5843 TTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCT 5902 Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759 | | || | |||||||| ||||||||||| | | |||||| | || ||| | | Sbjct 5903 TCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAG 5962 Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819 | ||| ||||| || ||||||| |||||| | ||| || || | | | | | Sbjct 5963 TTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATT 6022 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 | || || || || ||||| | || || ||||| | || | ||||| | || Sbjct 6023 CGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTG 6082 Query 23880 CCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 || | ||||| | | | | || || ||||| | || || || ||||| ||||| Sbjct 6083 CCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACG 6142 Query 23940 CATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980 ||| | || || | ||||| ||| |||||||| |||||| Sbjct 6143 TATACTGGAAATCCCTATCGTACACGATGGCCGAGTTCAAA 6183 >seq350 Length=48333 Score = 165 bits (182), Expect = 7e-36 Identities = 546/836 (65%), Gaps = 21/836 (3%) Strand=Plus/Plus Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650 || ||||| || || ||||||| |||||| | || ||||||||||| | || ||| Sbjct 24891 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGG 24950 Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707 | | | || || |||||| ||| ||| || | || ||||||||| Sbjct 24951 AACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCC 25010 Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767 || || || ||||||||||| || || ||||| |||| || || ||||| ||| | Sbjct 25011 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATT 25070 Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 | ||||| | | || ||||| || ||| | |||||||| | || || |||| Sbjct 25071 CCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACT 25130 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886 || || | | |||||||| ||| | |||||| | || || | | | ||||||| Sbjct 25131 TACTCCTTGTTGATCGATACTTACATCAAGGACCCTAAAGA-AAGTGAATTCTTGTTCAA 25189 Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946 || || | || || || | |||| ||||||| || ||| | | | |||||| | Sbjct 25190 TGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCA 25249 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 | ||| ||| ||| | || || ||| | || || ||| || | |||||| | || Sbjct 25250 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTT 25309 Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066 || || || |||||| | || || ||| |||| || | || |||||||||| | Sbjct 25310 TTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTT 25369 Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 || ||| |||||| ||||| | | ||||| ||| | || || || ||||| ||| | Sbjct 25370 AACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 25429 Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGCATCTTG--GACATTATCA 58182 ||| | | || | || ||||| ||| | | |||| ||| | ||| ||| Sbjct 25430 GTTGTTCGCCCATTTGAAGAACAAACCAGACCCAGCCATCG----TTGAAAAAATTGTCA 25485 Query 58183 CCGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTC 58241 ||||||| || | || ||| || || | || || ||| |||| || || |||| Sbjct 25486 CCGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCTTTGCTA 25544 Query 58242 GGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTC 58301 ||||||||| ||| || ||| | ||| ||||||| || ||||||||||| ||| | Sbjct 25545 GGTATGAACGCTGACTTAATGAACCAATACGTTGAGTTCGTCGCCGACAGACTGTTGGTT 25604 Query 58302 GAACTGATTGGAGAGCGTCATTACAACACG---AAAAATCCGTTTGATTTTATGAATCTG 58358 | || | || | | ||| ||| | |||| || || ||||| ||| | Sbjct 25605 G--CT-TTCGGTAACAAGAAATACTACAAGGTCGAAAACCCCTTCGATTTCATGGAAAAC 25661 Query 58359 ATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 ||||| | | || ||||| ||||| |||||||| | |||| || || ||||| Sbjct 25662 ATCTCCTTGGCCGGTAAGACTAACTTCTTCGAAAAGAGAGTTTCTGACTACCAAAA 25717 >seq351 Length=81428 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| || ||||| || || | || |||||| | ||| Sbjct 30676 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 30735 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || ||| ||||||||||| | || || || || Sbjct 30736 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 30795 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || ||| | |||||| || || || ||||| ||| Sbjct 30796 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 30855 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || | ||||| || || || || || || |||| Sbjct 30856 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 30904 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || ||||| ||||| | || |||||| | ||| Sbjct 30904 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 30963 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || ||| |||||||||||| | || || || || Sbjct 30964 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 31023 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || ||| | |||||| || || || || || ||| Sbjct 31024 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 31083 Query 31373 ATTCAAAAAGAATC 31386 || ||||| ||||| Sbjct 31084 ATCCAAAAGGAATC 31097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763184909840