Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766305.2_202014-10-
12] 577 sequences; 11,844,220 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq477 132 6e-26
seq501 114 2e-20
seq484 100 3e-16
>seq477
Length=124991
Score = 132 bits (146), Expect = 6e-26
Identities = 387/588 (66%), Gaps = 26/588 (4%)
Strand=Plus/Plus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| ||
Sbjct 78392 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 78451
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| ||||| | || ||||| | | ||| ||||| | || | ||| |
Sbjct 78452 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 78511
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| | |||| | || ||||| ||| ||||| || ||||| || || |||
Sbjct 78512 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 78571
Query 164578 GCT-CAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | ||| | | ||| | || || ||||| || |||||||| ||| | ||||
Sbjct 78572 GGTACAA--TGCTGAATGCCAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGAG 78627
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|| || || ||| ||||||| || || | || || ||| |||| || |||| |||
Sbjct 78628 TAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGA 78687
Query 164694 ACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAGA 164750
| | | | || ||| | || | | |||||| ||||| |||| |||||| | ||
Sbjct 78688 ATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGGA 78744
Query 164751 TGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--GT 164798
| || ||| ||| | | ||| | | || || | || | || || ||
Sbjct 78745 TTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGT 78804
Query 164799 TAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGG 164858
|||||| ||| | ||||||| |||||||| || || ||||||||||| || | ||
Sbjct 78805 TAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGG 78864
Query 164859 TATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATT 164918
||||||||| || |||||||| || | |||| | || || || ||| |||| ||| |
Sbjct 78865 TATGACCAATCGTAAAGATTTAATAGACGGTGCTCTTTTGCGTCCAGGTAGATTTGAAGT 78924
Query 164919 GAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
|| | ||||| |||||||| || ||||| | || ||||||||
Sbjct 78925 CCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 78972
>seq501
Length=83827
Score = 114 bits (126), Expect = 2e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| |
Sbjct 32904 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 32845
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| || |||||| | |||||| |||||||||||| ||||| ||| ||||| || |
Sbjct 32844 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 32785
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| ||| | ||||||||||| |||||| ||||| ||| |||||
Sbjct 32784 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 32742
>seq484
Length=236755
Score = 100 bits (110), Expect = 3e-16
Identities = 366/571 (64%), Gaps = 43/571 (8%)
Strand=Plus/Plus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757
||||||||||||||||||| | |||||| ||| || || |||||| | ||| | |
Sbjct 126034 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 126091
Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814
|| | ||||||| || | ||| ||| || ||| | || | |||||
Sbjct 126092 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAAAT--TTGTT 126149
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
|||| | || | || || ||| ||||| ||| ||||| || | |||||||| || |
Sbjct 126150 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 126209
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
||||||| | ||| || ||| ||| |||||| | || || || ||||| || || |
Sbjct 126210 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 126269
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993
||||| ||||| || || |||||||| || | ||| || || ||| || ||
Sbjct 126270 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 126325
Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023
| || | ||| | | |||| || || | ||
Sbjct 126326 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 126385
Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083
| ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| |
Sbjct 126386 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 126445
Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143
|| | |||||| | |||||||| |||| ||| |||| || |||||||| |||
Sbjct 126446 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATA 126505
Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203
|| || || ||| | || || | | || ||||| |||||||| |||||||||
Sbjct 126506 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 126565
Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTT 7234
|| ||||||| || || | ||| ||| |||
Sbjct 126566 AATCCATAAACGGGCCCCAGATCTCCTACTT 126596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595867702273200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |