Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766305.2_202014-10-
12] 577 sequences; 11,844,220 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq351 179 7e-40
seq271 87.8 3e-12
>seq351
Length=81428
Score = 179 bits (198), Expect = 7e-40
Identities = 172/218 (79%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| |||||||| || || ||||| ||||| || || || || || |||||||
Sbjct 30883 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 30824
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || | ||||||||| || || || || ||||||||||||||||
Sbjct 30823 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 30764
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| |
Sbjct 30763 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 30704
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471
| || | ||||||||||| |||||||| || ||||||
Sbjct 30703 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 30667
Score = 129 bits (142), Expect = 1e-24
Identities = 145/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 68268 GACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCG 68327
|| || ||||||||||| || || || | || || || ||||||| |||||| |||||
Sbjct 31097 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCA 31038
Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387
|| || | || ||||| || || || || ||||||||||| || || || | ||| |||
Sbjct 31037 AAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACG 30978
Query 68388 GCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447
||||| ||||| | ||||| || || || ||||||||||| || || | |||||
Sbjct 30977 TTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTA 30918
Query 68448 ACGAATATCTGCAT 68461
|| || ||||||||
Sbjct 30917 ACAAAGATCTGCAT 30904
Score = 116 bits (128), Expect = 7e-21
Identities = 109/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || | ||| || |||||||| ||||| || || || || || || || || |||||
Sbjct 31391 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 31332
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| ||||| || || | |||||| ||||| || ||||| |||||||||||
Sbjct 31331 TTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 31272
Query 68369 TTGAATCTTTGCCTTGACG 68387
|||||| || | ||| |||
Sbjct 31271 TTGAATTTTCGACTTAACG 31253
>seq271
Length=102512
Score = 87.8 bits (96), Expect = 3e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 93823 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 93882
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
||| || ||||| || || || || | |||||||||||
Sbjct 93883 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGT 93920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921615752798440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |