Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766305.2_202014-10- 12] 577 sequences; 11,844,220 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq351 172 1e-37 seq271 93.3 8e-14 seq58 91.5 3e-13 >seq351 Length=81428 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673 || || || ||||| || || |||||||| || |||||||||||||||| || || || Sbjct 30872 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 30813 Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733 |||||||| | |||||||||||||||||| || |||||||| |||||||| || | || Sbjct 30812 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 30753 Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793 || || || || ||||| || ||| |||||||| ||||| || || || ||||| ||| Sbjct 30752 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 30693 Query 82794 TTTACAAATATCTGCATTAT 82813 || || || |||||||| || Sbjct 30692 TTGACGAAAATCTGCATAAT 30673 Score = 138 bits (152), Expect = 2e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 82615 TAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAG 82674 ||||||| || || || || || ||||| | |||||||||||||||| || || || | Sbjct 31099 TAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGG 31040 Query 82675 CAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTA 82734 ||||||| | || |||||||||||||| || |||||||| || || || || | || | Sbjct 31039 CAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAA 30980 Query 82735 CATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCT 82794 | || || ||||| || | ||| || || ||||| || || || || ||||| |||| Sbjct 30979 CGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCT 30920 Query 82795 TTACAAATATCTGCAT 82810 | ||||| |||||||| Sbjct 30919 TAACAAAGATCTGCAT 30904 Score = 114 bits (126), Expect = 3e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635 |||| |||| || ||||| | || || | ||| ||||| || || || || ||||| | Sbjct 31413 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 31354 Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695 | || || || ||||||| ||||||||||| || || ||||| || | |||||| || | Sbjct 31353 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 31294 Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 ||||||| || |||||||| |||||||| || Sbjct 31293 CTGGAGGAATACCTTCCTTGTCTTGAATTTT 31263 >seq271 Length=102512 Score = 93.3 bits (102), Expect = 8e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||| ||||||||||| || || || || || || || Sbjct 93808 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 93867 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTG 82693 | | ||||||| ||||| | ||| || ||||||||||| | ||||||||| Sbjct 93868 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTG 93918 >seq58 Length=62445 Score = 91.5 bits (100), Expect = 3e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || |||||||||| ||| |||||||| || || || || |||| Sbjct 62341 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 62400 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGAT 82681 | | ||||||||||||| | ||| || ||||||||||| Sbjct 62401 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGAT 62440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981819941535603