Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766305.2_202014-10- 12] 577 sequences; 11,844,220 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq351 134 3e-26 seq526 93.3 1e-13 seq310 91.5 4e-13 >seq351 Length=81428 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225520 GATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCG 225579 ||||| ||||||| ||||| || | ||| ||||| || |||||||||||||| || || Sbjct 31097 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCA 31038 Query 225580 AAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACA 225639 ||||| | | ||||| || || || |||||||||||||| ||||| || ||| || Sbjct 31037 AAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACG 30978 Query 225640 GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||| |||| ||| || ||||| ||||| || || || |||||||| || Sbjct 30977 TTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTT 30919 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||| || | ||||| || || || | |||||||| | || ||||| Sbjct 30893 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 30834 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || |||||||||||||| || || ||||| | || |||||| || || || ||||||||| Sbjct 30833 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 30774 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| || || ||| || |||||||| || || | ||| || || || || Sbjct 30773 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 30714 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || |||||||| || | ||| | ||||| Sbjct 30713 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 30676 Score = 123 bits (136), Expect = 6e-23 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 |||| ||||||||| |||||||| || ||||| | |||||| || | || ||||| ||| Sbjct 31393 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 31334 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 |||||||| ||||| || || || || | || ||| ||||| || ||||||||||||||| Sbjct 31333 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 31274 Query 225619 TCTTGGATCTT 225629 ||||| || || Sbjct 31273 TCTTGAATTTT 31263 >seq526 Length=7285 Score = 93.3 bits (102), Expect = 1e-13 Identities = 188/274 (69%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503 |||||||| || || | | ||| |||||| ||| || | | ||| | || || Sbjct 806 TTATATTTTATGTTAGCTATTTTTAGTGGTATGGCAGGAACAGCAATGTCTTTAATCATT 865 Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTACAA 7562 || |||||||||||||| || ||||| ||| |||| | ||||||| || | | || Sbjct 866 AGATTAGAATTAGCTGCACCTGGTTCACAA-TATTTACATGGTAATTCACAGTTATTTAA 924 Query 7563 CGTTATTATTACGGCG-CATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGA 7621 ||| ||| || | ||||| | | || |||||||| || || ||||| | | | | Sbjct 925 TGTT-TTAGTAGTTGGTCATGCTGTATTAATAATTTTCTTCTTAGTAATGCCTGCTTTAA 983 Query 7622 TAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTC 7681 | || || || || || | || | || ||||||||||| ||| |||||| || |||| Sbjct 984 TTGGTGGATTTGGTAACTATTTATTACCATTAATGATTGGAGCTACTGATACAGCATTTC 1043 Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715 |||| |||| || || |||||| || |||| Sbjct 1044 CAAGAATTAATAACATTGCCTTTTGAGTATTACC 1077 >seq310 Length=72946 Score = 91.5 bits (100), Expect = 4e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || |||||||| || || |||||||| || |||||||| Sbjct 49991 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCGGAGACATCACC 50050 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569 |||| ||||| | |||||| || || |||| || ||| Sbjct 50051 ACCTTGGGTTTCAATAACAGGCAAAGCAGTTAAAGAACCA 50090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192522383840438