Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766315.2_202014-10- 12] 614 sequences; 11,507,974 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq479 104 4e-18 seq463 102 1e-17 >seq479 Length=56038 Score = 104 bits (114), Expect = 4e-18 Identities = 186/269 (69%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 17224 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 17166 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 17165 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 17106 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || ||||| |||| | | |||| ||| || || | || || || Sbjct 17105 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 17046 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 17045 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 16986 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | || ||||| || |||||| Sbjct 16985 TAGAACCTTATACGGTTTCGGTGGTTAAT 16957 Score = 82.4 bits (90), Expect = 1e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 17410 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 17352 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| Sbjct 17351 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGA 17295 >seq463 Length=32635 Score = 102 bits (112), Expect = 1e-17 Identities = 168/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 6882 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 6940 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 6941 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 7000 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || ||||| |||| | | |||| ||| || || | || || || Sbjct 7001 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 7060 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 7061 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 7120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074638615502