Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766315.2_202014-10-
12] 614 sequences; 11,507,974 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq523 123 2e-23
seq148 93.3 3e-14
seq60 93.3 3e-14
>seq523
Length=38811
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 21972 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 21913
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| || | || || |||||||| ||||| | ||| |||||| | ||
Sbjct 21912 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 21853
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | | ||| | || | |||||| ||||| |
Sbjct 21852 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 21794
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||| || || || || |||||||||||||||
Sbjct 21793 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 21744
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 22200 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 22141
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || |||||||||||||| | || |||||| | ||
Sbjct 22140 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 22081
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| ||| || | ||| | |||||| ||||| |
Sbjct 22080 AATACCTTCCTTGTCTTGAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 22022
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || ||||||| ||||| || || || ||||||
Sbjct 22021 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 21972
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| ||
Sbjct 21744 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 21685
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 21684 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 21625
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| |
Sbjct 21624 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 21566
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| || || || || || || |||||||||
Sbjct 21565 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 21516
Score = 102 bits (112), Expect = 5e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| | || || | || |||||| ||| ||||| || ||||| ||
Sbjct 22657 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 22598
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || || | | || || | ||| || |||||||||||||| | ||||| ||| |
Sbjct 22597 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 22538
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697
|| | |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||
Sbjct 22537 AGGAATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCAATAGTGTCAGAAGATT 22479
Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || | || || || || ||||||| ||||| || || || ||||||
Sbjct 22478 CAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 22426
Score = 82.4 bits (90), Expect = 5e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 22426 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 22367
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || | ||| || || ||||||||||| | ||| ||||| | ||
Sbjct 22366 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 22307
Query 33642 CACACCTTCTTTGTC 33656
| ||||||||| ||
Sbjct 22306 GATACCTTCTTTATC 22292
>seq148
Length=28490
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || | |||| |||||||| |||||||| || ||
Sbjct 17551 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 17492
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||| ||||| | || || || | ||
Sbjct 17491 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 17432
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | |||| ||| | ||||| ||||| |
Sbjct 17431 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 17373
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| || || || || |||||
Sbjct 17372 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 17333
>seq60
Length=22811
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| |||||||| || ||||| |||||||| ||||
Sbjct 8847 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 8788
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || |||||||| || || ||||| ||||| | || || || | |
Sbjct 8787 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8728
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||| |||||
Sbjct 8727 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 8669
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| ||||| || || || || || |||||
Sbjct 8668 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328701540266880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |