Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766375.2_202014-10-
12] 344 sequences; 11,668,021 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq220 118 9e-22
seq243 98.7 8e-16
seq271 84.2 2e-11
>seq220
Length=155371
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 146249 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 146190
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || ||||| || || || || |||||| | || ||
Sbjct 146189 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 146130
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || |||||||||||| | |||| || |||| |||
Sbjct 146129 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 146070
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || ||||||||||||||||| ||| |||| || |||| |||| ||
Sbjct 146069 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 146020
>seq243
Length=55186
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| ||||||| | || || || || || ||| || ||| | |
Sbjct 31336 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 31395
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | |||| |||||| |||||||||||| | || ||||||
Sbjct 31396 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 31455
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||| | || ||||| || || ||| | |||||| | ||| || | || |||||
Sbjct 31456 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 31515
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| ||||||||||||||||||||| |||||||
Sbjct 31516 ATCCAAAAGGAATCTACTCTTCACTTGGTGTT 31547
>seq271
Length=175708
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
|||| || ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 127673 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 127614
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 127613 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 127554
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || ||||| |||||||| ||||
Sbjct 127553 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAAT 127494
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | ||| | || || |||| |||| ||
Sbjct 127493 CCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 127460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410795077734416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |