Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766375.2_202014-10-
12] 344 sequences; 11,668,021 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq243 147 2e-30
seq271 131 1e-25
seq220 131 1e-25
seq280 109 4e-19
>seq243
Length=55186
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||||||| | ||| || ||||| |||||||||||||| |
Sbjct 31334 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 31275
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || ||||| || |||||| | ||||||||||| ||||| || |||
Sbjct 31274 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGA 31215
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||| | || || | || | |||||||||| ||| ||
Sbjct 31214 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCRATAGTGTCAGAAGATTCAAC 31156
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || || | || || ||||| || |||||
Sbjct 31155 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 31108
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||||| ||||| || |||||||| || || ||||
Sbjct 31790 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 31731
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || ||||| || || ||| | |||||||||||||| || || |||
Sbjct 31730 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 31671
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||| | || || | || | |||||||||| ||| ||
Sbjct 31670 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCRATAGTGTCAGAAGATTCAAC 31612
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || || | || || ||||| || |||||
Sbjct 31611 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 31564
Score = 102 bits (112), Expect = 6e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 30863 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 30804
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || || ||||| || ||||||
Sbjct 30803 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 30744
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| |||||| | || || | || | || || ||| ||| ||||| | ||||| ||
Sbjct 30743 TG-AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 30685
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || || || || ||||||||
Sbjct 30684 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 30652
>seq271
Length=175708
Score = 131 bits (144), Expect = 1e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || || || | |||||||||||||||||||| || || |
Sbjct 127460 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 127519
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 127520 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 127579
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| ||
Sbjct 127580 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 127638
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| || || || |||||
Sbjct 127639 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 127677
>seq220
Length=155371
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || || || ||||| ||||| ||||| || || |
Sbjct 146020 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 146079
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 146080 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 146139
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | |||||||||| ||| |||
Sbjct 146140 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 146199
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || ||||| || || ||||| || || || || || ||||| ||
Sbjct 146200 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 146249
>seq280
Length=105098
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || |||||||| | |||||||| ||||| ||||| || || |
Sbjct 63167 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 63226
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 63227 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63286
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | ||||||||| ||| |||
Sbjct 63287 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 63346
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| | ||| || || || ||||| || || ||||| ||
Sbjct 63347 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 63384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217584968504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |