Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766375.2_202014-10-
12] 344 sequences; 11,668,021 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq243 159 8e-34
seq271 140 8e-28
seq220 138 3e-27
seq280 134 3e-26
>seq243
Length=55186
Score = 159 bits (176), Expect = 8e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| | || | ||||||||| || || ||||||||||| || || | | ||| ||
Sbjct 31097 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 31038
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|||||||| |||||||| || || ||||| | | ||||| || ||||| | ||||||
Sbjct 31037 CCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCC 30978
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||||||||| || || ||||| ||||| ||||| ||| ||||||||| | ||||
Sbjct 30977 TTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTG 30918
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | |||||| ||||| | ||||||
Sbjct 30917 ATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 30880
Score = 156 bits (172), Expect = 1e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||||||||||||||||||||| ||||| || || || |||| || || || ||||||||
Sbjct 31773 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 31714
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||||| || || || || | | ||| ||||| ||||||| ||||||||||| ||
Sbjct 31713 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 31654
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
|| || || ||||| || || |||||||| ||||||||| || || || |||||
Sbjct 31653 AATTTTCGACTTAACGTTGTCRATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 31594
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| ||||| | |||||
Sbjct 31593 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 31564
Score = 136 bits (150), Expect = 9e-27
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| |||||||| || ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 31304 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCA 31245
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | |||||| || ||||||| ||||||||||| || || || ||
Sbjct 31244 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 31185
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || || |||||||| ||||||||| || || || ||||| || || || |||
Sbjct 31184 ACGTTGTCRATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 31125
Query 211098 TTTACAAACACCTGCAT 211114
|| ||||| | |||||
Sbjct 31124 TTGACAAAAATTTGCAT 31108
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| ||||| ||||| || | |||||||| || || ||||| ||||| | || || ||
Sbjct 30869 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 30810
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| ||||| |||||||| || || ||||| | | |||||| || ||||| | ||||||
Sbjct 30809 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 30750
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| || || || || ||||| |||||||| || || |||||| || | ||
Sbjct 30749 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 30690
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | |||||| || || | ||||||
Sbjct 30689 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 30652
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| | || | ||||||||| || || ||||||||||| || || | | ||| ||
Sbjct 31553 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 31494
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|||||||| || ||||| || || || || | | ||||| || ||||| | |||||
Sbjct 31493 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 31434
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| || || || || ||| ||||| || || ||||| || ||||||||| || ||
Sbjct 31433 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 31374
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || ||||| || || || | |||||
Sbjct 31373 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 31336
>seq271
Length=175708
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || ||
Sbjct 127471 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 127530
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 127531 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 127590
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 127591 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 127650
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| |||||
Sbjct 127651 GGTCTTACCAGTCAAAGTCTTGACAAA 127677
>seq220
Length=155371
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| ||||| || || ||||||||||| || || | | || || ||
Sbjct 146031 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 146090
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||||||||| |||| ||||||||
Sbjct 146091 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 146150
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || || |||||||| |||||| || || || ||
Sbjct 146151 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 146210
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 146211 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 146249
>seq280
Length=105098
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | |||||| || ||||||||||| || || | || || || ||
Sbjct 63178 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 63237
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 63238 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 63297
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || ||||||||||| |||||| || | ||||||
Sbjct 63298 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 63357
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| || ||
Sbjct 63358 GGTCTTACCAGTCAAAGTCTTAACGAA 63384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159146891037560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |