Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766395.2_202014-10- 12] 388 sequences; 11,636,794 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq352 105 2e-17 >seq352 Length=50894 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || || || |||||||| | || ||||| || || ||||||||||| | | ||| Sbjct 27257 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 27198 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || |||||||| || ||||| ||||| | || || || || | | ||| ||| Sbjct 27197 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 27138 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| || || | || | | | || ||| || ||||| | Sbjct 27137 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 27078 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | |||||| ||||| | |||||| Sbjct 27077 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27037 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 151918 TTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAA 151977 ||||||||||||| || | || ||||| ||||||||||| || ||||| ||||| | Sbjct 27451 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCA 27392 Query 151978 GCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTA 152037 |||||| || |||| | ||| |||||||| || || ||||| || || | || | Sbjct 27391 ACCTCTGTTGATCCGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGA 27332 Query 152038 CGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 |||| || || || || | ||| || ||||| || || | |||||| || |||| Sbjct 27331 TCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGA 27272 Query 152098 CCTGCAT 152104 |||||| Sbjct 27271 TCTGCAT 27265 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 151918 TTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAA 151977 ||||||||||||| || | || ||||| ||||||||||| || || || || || | Sbjct 27716 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCA 27657 Query 151978 GCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTA 152037 ||||| || |||| | ||| ||||| || ||||||||||| |||||| | || | Sbjct 27656 ATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAA 27597 Query 152038 CGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 |||| ||| || || || || || ||||| || || || ||||| || ||||| | Sbjct 27596 TAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAA 27537 Query 152098 CCTGCAT 152104 ||||| Sbjct 27536 TTTGCAT 27530 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 28048 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 27989 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 27988 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 27929 Query 152015 AATTTT 152020 |||||| Sbjct 27928 AATTTT 27923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815064068348