Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766415.2_202014-10-
12] 389 sequences; 11,578,561 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq143 107 3e-19
seq149 104 4e-18
>seq143
Length=26807
Score = 107 bits (118), Expect = 3e-19
Identities = 186/268 (69%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||||||||| || || |||||||||||
Sbjct 4029 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 4087
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 4088 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 4147
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | || ||||| |||| | | |||| ||| || || | || || ||
Sbjct 4148 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 4207
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 4208 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 4267
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 4268 TAGAACCTTATATGGTTTCGGTGGTTAA 4295
>seq149
Length=273867
Score = 104 bits (114), Expect = 4e-18
Identities = 186/269 (69%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||||||||| || || |||||||||||
Sbjct 234191 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 234133
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 234132 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 234073
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | || ||||| |||| | | |||| ||| || || | || || ||
Sbjct 234072 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 234013
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 234012 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 233953
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | || ||||| || ||||||
Sbjct 233952 TAGAACCTTATACGGTTTCGGTGGTTAAT 233924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074844334577
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |