Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766415.2_202014-10-
12] 389 sequences; 11,578,561 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq259 111 1e-19
>seq259
Length=54143
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||| | ||| | ||| |||||| |||||||| ||||| ||
Sbjct 29938 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 29879
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| || || ||||||||||| || || | ||||| || || ||
Sbjct 29878 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 29819
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | |||||| | || || || || ||
Sbjct 29818 ATACCTTCCTTGTCT-TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 29760
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct 29759 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 29712
Score = 91.5 bits (100), Expect = 9e-14
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | |||||||||||| | || ||| || |||||||||||||| ||
Sbjct 30396 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 30337
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| ||||| ||||| || || | ||||| || || ||
Sbjct 30336 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGA 30277
Query 34600 ACTCCCTCCTTGTCT 34614
| || |||||||||
Sbjct 30276 ATACCTTCCTTGTCT 30262
Score = 89.7 bits (98), Expect = 3e-13
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 34520 TTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTA 34579
|||| ||||| || || || | |||| | ||||| || || ||||||||||| || |
Sbjct 30126 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCA 30067
Query 34580 AACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AA 34638
| | |||||| ||||| || | || |||||||| ||| ||| | |||||| ||
Sbjct 30066 ACCTCTGTTGATCCGGAGGGATACCTTCCTTGTCCTGGAT-TTTCGACTTAACGTTATCG 30008
Query 34639 ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAA 34698
|| ||||| | || || || | || || ||||||||||| || || || |||||
Sbjct 30007 ATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAG 29948
Query 34699 ATCTGCAT 34706
||||||||
Sbjct 29947 ATCTGCAT 29940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728107886637
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |