Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766435.2_202014-10- 12] 418 sequences; 11,614,948 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq230 98.7 2e-15 seq304 93.3 1e-13 seq323 87.8 4e-12 >seq230 Length=105263 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 41946 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 42005 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| |||||| | ||||| || || ||| Sbjct 42006 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 42065 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || ||| | | || |||||| |||| || || || ||| | || Sbjct 42066 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 42125 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 42126 TTGGTCTTGAGA 42137 >seq304 Length=103962 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 |||||| | ||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct 95421 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 95362 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||| || || |||||||| ||| | || |||||| Sbjct 95361 ATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 95326 >seq323 Length=56987 Score = 87.8 bits (96), Expect = 4e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || |||||||| || ||||| ||| || ||| |||||| | || || ||||| ||| Sbjct 23492 AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAAG 23433 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | |||||||| || || || | || ||||| | || || ||||| ||||||||| Sbjct 23432 CAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTCCACTCTTCAC 23373 Query 206374 CTTGTTTTGAG 206384 ||||| ||||| Sbjct 23372 CTTGTCTTGAG 23362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814470610978