Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766455.2_202014-10-
12] 431 sequences; 11,603,065 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq211 105 2e-17
seq172 98.7 2e-15
>seq211
Length=51028
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || || |||||||| | || ||||| || || ||||||||||| | | |||
Sbjct 23772 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 23831
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || |||||||| || ||||| ||||| | || || || || | | ||| |||
Sbjct 23832 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 23891
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||||||||| || || | || | | | || ||| || ||||| |
Sbjct 23892 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 23951
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || | |||||| ||||| | ||||||
Sbjct 23952 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 23992
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 151918 TTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAA 151977
||||||||||||| || | || ||||| ||||||||||| || ||||| ||||| |
Sbjct 23578 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCA 23637
Query 151978 GCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTA 152037
|||||| || |||| | ||| |||||||| || || ||||| || || | || |
Sbjct 23638 ACCTCTGTTGATCCGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGA 23697
Query 152038 CGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097
|||| || || || || | ||| || ||||| || || | |||||| || ||||
Sbjct 23698 TCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGA 23757
Query 152098 CCTGCAT 152104
||||||
Sbjct 23758 TCTGCAT 23764
Score = 93.3 bits (102), Expect = 1e-13
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
|||||| |||||||| ||||| ||||| || ||||| || | | ||||| ||||||||
Sbjct 23401 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 23460
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||| || ||||| || || | || |||||||| | | || |||||||| |||||
Sbjct 23461 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 23520
Query 152015 AATTTT 152020
||||||
Sbjct 23521 AATTTT 23526
>seq172
Length=339
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 151918 TTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAA 151977
||||||||||||| || | || ||||| ||||||||||| || || || || || |
Sbjct 339 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCA 280
Query 151978 GCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTA 152037
||||| || |||| | ||| ||||| || ||||||||||| |||||| | || |
Sbjct 279 ATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAA 220
Query 152038 CGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097
|||| ||| || || || || || ||||| || || || ||||| || ||||| |
Sbjct 219 TAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAA 160
Query 152098 CCTGCAT 152104
|||||
Sbjct 159 TTTGCAT 153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153814428385201
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |