Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766475.2_202014-10-
12] 415 sequences; 11,633,571 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq357 170 3e-37
seq368 138 2e-27
>seq357
Length=339
Score = 170 bits (188), Expect = 3e-37
Identities = 147/182 (81%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| || || |||||| ||| |||| ||| || || |||||||| ||||||
Sbjct 334 ATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTC 275
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|||||||| ||||| || |||||||||||||| ||||| |||| | || ||||||
Sbjct 274 TGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTG 215
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|||||||| ||||| ||||| |||||||| || |||||||| ||||| || || ||||||
Sbjct 214 TCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGC 155
Query 193359 AT 193360
||
Sbjct 154 AT 153
Score = 123 bits (136), Expect = 4e-23
Identities = 119/153 (78%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 161 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 102
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || || |||||||| ||||| |||||
Sbjct 101 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTG 42
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTT 193276
||| ||||| || ||||| || ||||| |||||
Sbjct 41 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTT 9
>seq368
Length=81668
Score = 138 bits (152), Expect = 2e-27
Identities = 178/245 (73%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | | || || ||||| || || | ||| || ||| || || ||
Sbjct 30881 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 30822
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||||| || |||| || || |||||||| || ||||| |||||||| |||
Sbjct 30821 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 30762
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | || | || || ||||||||||| |||
Sbjct 30761 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 30702
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368
||||| | ||||| |||||||| || | || || || || || ||||| | ||||||
Sbjct 30701 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 30642
Query 193369 TAAAA 193373
| |||
Sbjct 30641 TTAAA 30637
Score = 113 bits (124), Expect = 8e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| || || |||||| ||| |||| || || |||||||| || || |||
Sbjct 31061 ATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTC 31002
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|||||||| ||||| || ||||| || || || ||||| | || | || || ||
Sbjct 31001 TGTTGATCCGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTG 30942
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
||||| || ||||| |||| ||| || |||||||| || | || || ||||| || |||
Sbjct 30941 TCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGC 30882
Query 193359 AT 193360
||
Sbjct 30881 AT 30880
Score = 95.1 bits (104), Expect = 2e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| ||||| | | || || || | || | ||| || |||||| ||||| |
Sbjct 31334 TACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCG 31275
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| | ||||||| ||| |||| ||| || ||||||||||| ||||| || || || ||||
Sbjct 31274 ACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAG 31215
Query 193252 GTATTCCTTCTTTATCTTGTATTTT 193276
| || ||||| || ||||| |||||
Sbjct 31214 GAATACCTTCCTTGTCTTGAATTTT 31190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899649733042800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |