Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766475.2_202014-10- 12] 415 sequences; 11,633,571 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq368 111 1e-19 seq357 100 2e-16 >seq368 Length=81668 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| || Sbjct 30879 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 30820 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || | || || |||||||| ||||| | || |||||| | || Sbjct 30819 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 30760 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| | Sbjct 30759 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 30701 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || || || || || ||||||||| Sbjct 30700 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 30651 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 33563 TTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCA 33622 |||| |||||||| || || | || | | || || | || || |||||||| |||| Sbjct 31066 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCA 31007 Query 33623 AACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC- 33681 | | ||| ||||| | || | |||||| ||||| |||||| || ||| | || Sbjct 31006 ACCTCTGTTGATCCGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT-AACGTTATCG 30948 Query 33682 ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAG 33741 | |||||| ||||| || || | ||||| |||||||| || || || || |||||| Sbjct 30947 ATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAG 30888 Query 33742 ATCTGCATA 33750 ||||||||| Sbjct 30887 ATCTGCATA 30879 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| ||||| | || || | || |||||| ||| ||||| || ||||| || Sbjct 31336 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 31277 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 || || || | | || || | ||| || |||||||||||||| | ||||| ||| | Sbjct 31276 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 31217 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTC 33666 || | |||||| ||||| ||||||| Sbjct 31216 AGGAATACCTTCCTTGTCTTGAATTTTC 31189 >seq357 Length=339 Score = 100 bits (110), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||||||| | || |||||| || ||||| ||||| || Sbjct 152 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 93 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||| ||| || || ||||||||||| | || |||||| | || Sbjct 92 CAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGG 33 Query 33642 CACACCTTCTTTGTCGGCAATTTTC 33666 | |||||| ||||| ||||||| Sbjct 32 AATACCTTCCTTGTCTTGAATTTTC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702337476800