Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766475.2_202014-10-
12] 415 sequences; 11,633,571 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq368 156 9e-33
seq357 123 5e-23
>seq368
Length=81668
Score = 156 bits (172), Expect = 9e-33
Identities = 149/188 (79%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 282913 TTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|||||||||||||||||| |||| || | ||||| ||||| || || ||||||||||||
Sbjct 31066 TTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATC 31008
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| | ||||| || || ||||| |||||||| ||||| || | || ||| |||||
Sbjct 31007 AACCTCTGTTGATCCGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCG 30948
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091
|| ||||| || | ||| || || | |||||| || ||||| |||||||||||||| ||
Sbjct 30947 ATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAG 30888
Query 283092 ATCTGCAT 283099
||||||||
Sbjct 30887 ATCTGCAT 30880
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || |||||||| ||| || || || |||||||| ||||
Sbjct 30879 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 30820
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| | || || ||||| || || |||||||||||||| | |||||| || ||
Sbjct 30819 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 30760
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| ||
Sbjct 30759 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 30700
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || || ||||| ||||||||||| ||||| ||||||||
Sbjct 30699 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 30652
Score = 89.7 bits (98), Expect = 1e-12
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| || |||||||| | ||||| | ||||| |||||||| || ||||||||
Sbjct 31296 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 31237
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
||||| | ||| ||||| |||||||| ||||||||||| || ||
Sbjct 31236 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 31190
>seq357
Length=339
Score = 123 bits (136), Expect = 5e-23
Identities = 144/189 (76%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 282913 TTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|||||||||||||||||| |||| || | ||||| |||||||| || || ||||| |||
Sbjct 339 TTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATC 281
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATC 283030
|| | ||||| || || ||||| || || ||||| || ||| ||||| ||| | ||
Sbjct 280 AATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAAT-TTTACTTTTGACGTTGTC 222
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|||||||| |||| ||| || || || || || ||||| || || | ||| || |||||
Sbjct 221 AATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAA 162
Query 283091 TATCTGCAT 283099
|| |||||
Sbjct 161 AATTTGCAT 153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046733634291410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |