Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766495.2_202014-10- 12] 389 sequences; 11,590,380 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq139 109 9e-19 seq260 87.8 3e-12 >seq139 Length=49849 Score = 109 bits (120), Expect = 9e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||| | ||||| || || || || | || || ||| | | Sbjct 32997 TGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTG 33056 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | || || || ||||| ||| || ||||| ||||| || ||||||| Sbjct 33057 ACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 33116 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | |||||||| ||||| ||| | || || ||||||| | | |||||||| | Sbjct 33117 AAAGATTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACA 33176 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | ||||| || || |||| ||||| |||| Sbjct 33177 TTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 33224 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || || | || || ||| | || Sbjct 32541 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 32600 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || ||||| ||| || ||||| || || || ||||||| Sbjct 32601 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 32660 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || | Sbjct 32661 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 32720 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || || || || | ||| | || || | ||||||| |||| Sbjct 32721 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 32768 >seq260 Length=183822 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 146139 CCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTA 146198 ||||| || ||||||||| | || ||||| ||||| ||||| || || |||||| || Sbjct 135571 CCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTG 135512 Query 146199 ACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | || || || || ||||||||||| ||| | || ||||| || |||| ||||| ||| Sbjct 135511 TCTGACTACAACATTCAAAAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 135452 Query 146259 A 146259 | Sbjct 135451 A 135451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786162577265880