Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766495.2_202014-10- 12] 389 sequences; 11,590,380 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq139 136 3e-27 seq55 134 1e-26 seq196 123 2e-23 >seq139 Length=49849 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||| || || ||| |||| || || || || ||| | ||| Sbjct 33224 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 33283 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| ||||||||||| |||||||| || || || |||||| Sbjct 33284 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 33343 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||| | ||||| || ||| | || || |||||| Sbjct 33344 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 33403 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || ||||| ||| | || | ||||| || Sbjct 33404 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGGTAT 33453 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || ||||| || ||| |||| || || || || ||| | || Sbjct 32996 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 33055 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || |||||||||||||| ||||| || || || |||||| Sbjct 33056 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 33115 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||| |||||||| || || | || ||||| ||| Sbjct 33116 CAAAGATTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 33175 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || |||||||| ||| | ||| | ||||| || Sbjct 33176 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 33225 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||| || | || || | ||||| ||| | ||| Sbjct 32540 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 32599 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || |||||||||||||| ||||| || || || |||||| Sbjct 32600 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 32659 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||| || || | |||||| || || | || ||||||||| Sbjct 32660 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 32719 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| |||||||| ||||||||| Sbjct 32720 ATTCAGAAGGAGTCCACCTTACAT 32743 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || ||||| || ||| |||| || || || || ||| | || Sbjct 33452 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 33511 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || |||||||||||||| ||||| || || || || || Sbjct 33512 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 33571 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||| || ||| | ||||| || || | || || ||||| Sbjct 33572 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 33631 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| || | || | || ||| | ||| ||||||| Sbjct 33632 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 33678 >seq55 Length=102908 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| | ||||| ||| ||||||| || ||||| ||| | || Sbjct 94163 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 94104 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||| || ||||| || ||| Sbjct 94103 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 94044 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| || || | ||||| |||||| Sbjct 94043 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 93984 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || || |||| ||||| ||| | ||| | ||||| Sbjct 93983 ATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 93937 >seq196 Length=104237 Score = 123 bits (136), Expect = 2e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || ||| |||| || ||| | || ||| | ||||| ||| | || ||| | ||| Sbjct 40885 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 40944 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || |||||||| ||||| || ||||| || ||||| | || Sbjct 40945 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 41004 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || || |||||||||||| || || | || || |||||||| |||||| Sbjct 41005 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 41064 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||||| ||| | || | ||||| || Sbjct 41065 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTAT 41105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916285209280