Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766495.2_202014-10- 12] 389 sequences; 11,590,380 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq139 159 8e-34 seq55 138 3e-27 seq196 134 3e-26 >seq139 Length=49849 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||||||||| || || ||||||||||| || || | | ||| || Sbjct 32985 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 32926 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| |||||||| || || ||||| | | ||||| || ||||| | |||||| Sbjct 32925 CCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCC 32866 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||||||||| || || ||||| ||||| ||||| ||| ||||||||| | |||| Sbjct 32865 TTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTG 32806 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | |||||| ||||| | |||||| Sbjct 32805 ATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32768 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||||||||||||||||||||| ||||| || || || |||| || || || |||||||| Sbjct 33661 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 33602 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || || || || | | ||| ||||| ||||||| ||||||||||| || Sbjct 33601 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 33542 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 || || || ||||| || || |||||||| ||||||||| || || || ||||| Sbjct 33541 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 33482 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| | ||||| Sbjct 33481 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 33452 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || |||||||| || ||||||||||| | || || || || |||||||| ||||| || Sbjct 33192 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCA 33133 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | | |||||| || ||||||| ||||||||||| || || || || Sbjct 33132 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 33073 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| |||||||| ||||||||| || || || ||||| || || || ||| Sbjct 33072 ACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 33013 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 33012 TTGACAAAAATTTGCAT 32996 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || ||||| ||||| || | |||||||| || || ||||| ||||| | || || || Sbjct 32757 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 32698 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||| |||||||| || || ||||| | | |||||| || ||||| | |||||| Sbjct 32697 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 32638 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || || || || ||||| |||||||| || || |||||| || | || Sbjct 32637 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 32578 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | |||||| || || | |||||| Sbjct 32577 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32540 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||||||||| || || ||||||||||| || || | | ||| || Sbjct 33441 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 33382 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| || ||||| || || || || | | ||||| || ||||| | ||||| Sbjct 33381 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 33322 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || || || || ||| ||||| || || ||||| || ||||||||| || || Sbjct 33321 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 33262 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || ||||| || || || | ||||| Sbjct 33261 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 33224 >seq55 Length=102908 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| ||||| || || ||||||||||| || || | | || || || Sbjct 93948 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 94007 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| |||| |||||||| Sbjct 94008 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 94067 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || || |||||||| |||||| || || || || Sbjct 94068 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 94127 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| || || | ||||| || Sbjct 94128 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 94166 >seq196 Length=104237 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | || | |||||| || ||||||||||| || || | || || || || Sbjct 41091 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 41032 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 41031 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 40972 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || ||||||||||| |||||| || | |||||| Sbjct 40971 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 40912 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 40911 GGTCTTACCAGTCAAAGTCTTAACGAA 40885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146222713985