Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766515.2_202014-10- 12] 402 sequences; 11,597,034 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq135 111 1e-19 >seq135 Length=47795 Score = 111 bits (122), Expect = 1e-19 Identities = 140/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 42923 TTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCA 42982 |||| | ||||| || ||||| || | | || || | ||| || || |||||||||| Sbjct 15815 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCA 15874 Query 42983 ATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCC 43040 ||| ||||||||| | || | ||||||||| || ||| | ||| |||||| || | Sbjct 15875 ATCTCTGTTGATCCGGAGGGATACCTTCTTTATCT-TGAATTTTACT-TTTGACGTTGTC 15932 Query 43041 AACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAA 43100 || |||||| || || || |||| |||||||| || || ||||||||||| || || Sbjct 15933 AATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAA 15992 Query 43101 AATTTGCAT 43109 ||||||||| Sbjct 15993 AATTTGCAT 16001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367731527316