Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766515.2_202014-10-
12] 402 sequences; 11,597,034 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq135 120 3e-22
seq318 82.4 7e-11
>seq135
Length=47795
Score = 120 bits (132), Expect = 3e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||||||||| ||||||||| ||||| ||||| || || || | |
Sbjct 15991 AAAATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATG 16050
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|||||||| || || | || ||||| || || || |||| || ||||||||
Sbjct 16051 TTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGT 16110
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929
|||||||||||||||||||| ||||| | |||||| | |||
Sbjct 16111 TGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTT 16151
Score = 102 bits (112), Expect = 7e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| || ||||| || ||| ||||||| || || || ||||| ||||| |||||||| ||
Sbjct 16281 ATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCCTT 16340
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||||| | ||| ||| ||| ||||| | | || || || | |||||
Sbjct 16341 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 16400
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||| || || | ||| || ||||||||||||||
Sbjct 16401 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16436
Score = 102 bits (112), Expect = 7e-17
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859
|||| || || || || ||||| || | ||| ||||| || || | || || |
Sbjct 16457 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 16516
Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919
|||| || ||| ||||||| |||||||| ||||||||||| |||||||| ||||| | ||
Sbjct 16517 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 16576
Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979
|||| | ||| ||| | ||| || || | || || || | || |||||||| |
Sbjct 16577 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 16636
Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | ||| || || || ||||||||
Sbjct 16637 CGGTCAAAGTCTTGACGAAAATCTGCAT 16664
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||| | ||| || | ||| | ||| || |||||||| | || || || |
Sbjct 15542 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 15601
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| || || || || ||| |||| || ||||||||||| |||||||||
Sbjct 15602 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 15661
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTT 94929
|||||||| ||||| | |||||| | |||
Sbjct 15662 ATACCTTCCTTGTCTTGAATTTTCGACTT 15690
>seq318
Length=103028
Score = 82.4 bits (90), Expect = 7e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||| | ||||||||||||||| | ||| || ||| |
Sbjct 94339 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 94398
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890
| ||| | ||| |||| || || || ||||||| |||||||| ||
Sbjct 94399 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTG 94448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288947336720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |