Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766515.2_202014-10- 12] 402 sequences; 11,597,034 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq176 293 3e-74 >seq176 Length=164401 Score = 293 bits (324), Expect = 3e-74 Identities = 909/1389 (65%), Gaps = 42/1389 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 141275 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 141334 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 141335 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAACACCATGCTTCATGATATCT 141392 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 141393 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 141451 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 || | ||||| || || ||||| || | || ||||| || | ||| | |||| | Sbjct 141452 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 141509 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | |||||| || |||| ||| || ||||| || ||||||||||| | ||| Sbjct 141510 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 141569 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | | |||||| || |||||||||| | || ||| || || || |||||| Sbjct 141570 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 141629 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 ||||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| Sbjct 141630 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 141689 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || |||| | |||||||||| ||||| ||| ||||||| || | |||||| Sbjct 141690 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 141749 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226 || | ||||| | | | ||| ||||| |||| ||| || | Sbjct 141750 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 141808 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || Sbjct 141809 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 141866 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| |||||||| || ||| || || || || ||||| ||| || Sbjct 141867 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 141926 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 |||| || ||||||||||| | | | | || || || || || || || | || | | Sbjct 141927 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 141986 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | | ||| | || || | | || | || | || || || |||||| Sbjct 141987 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 142043 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525 || || || || |||||||| ||||| ||| | ||| || || ||| Sbjct 142044 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 142102 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | | ||| ||| ||| || || |||||||||||||| || ||||| Sbjct 142103 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 142162 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 142163 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 142221 Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC-- 111702 |||| || || | ||||| || |||||||| || || || | || | | || Sbjct 142222 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 142281 Query 111703 --CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 |||| | ||| | || | ||||| || || ||| || || || |||| ||| Sbjct 142282 GTCTTT-TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATA 142340 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820 ||||| | ||| | || ||| ||||| || ||| ||| | | | | | Sbjct 142341 GGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATG 142400 Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 | |||||| || | |||||||| ||||| || || || ||||| ||| | | Sbjct 142401 TTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAG 142460 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || | || || || | ||| ||||||||||| |||| | | ||| ||| |||||| Sbjct 142461 GTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATT 142520 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-G 111999 || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | Sbjct 142521 TGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAG 142579 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || || || || || ||| || || ||| ||||||||||| | ||| Sbjct 142580 AGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGC 142639 Query 112060 GACCCGCAT 112068 ||| | ||| Sbjct 142640 GACTCTCAT 142648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028844139200