Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766515.2_202014-10-
12] 402 sequences; 11,597,034 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq135 132 1e-25
>seq135
Length=47795
Score = 132 bits (146), Expect = 1e-25
Identities = 142/185 (77%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || |||
Sbjct 15998 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 15939
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| || ||||| || |||||||| ||||||||||| || ||
Sbjct 15938 ACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAG 15879
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || || || |||||||| || || |||| | || || ||| |
Sbjct 15878 AGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAAC-CTTGTCTGACTACAACAT 15820
Query 178103 CCAAA 178107
|||||
Sbjct 15819 CCAAA 15815
Score = 114 bits (126), Expect = 3e-20
Identities = 138/185 (75%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||| | || || ||||| ||||| | ||||| ||| ||| |||
Sbjct 16433 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 16374
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || || || |||||||| ||||| ||||||||||| || ||
Sbjct 16373 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCGGATCAACAG 16314
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
| | ||||| ||||| || ||||| |||||||| || || |||| | || || ||| |
Sbjct 16313 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAAC-CTTGTCTGACTACAACAT 16255
Query 178103 CCAAA 178107
|||||
Sbjct 16254 CCAAA 16250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203725000031988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |