Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766535.2_202014-10- 12] 409 sequences; 11,627,096 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq188 134 2e-26 seq171 131 2e-25 seq190 120 4e-22 >seq188 Length=53718 Score = 134 bits (148), Expect = 2e-26 Identities = 176/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 155810 TTTATGTAATAAA--ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867 |||| ||||| | ||||| || || | || || ||||| || ||||| || ||||| Sbjct 29671 TTTAACTAATAGATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTG 29730 Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927 ||||| ||| ||| |||| || ||||| || ||||| ||||| || ||||| Sbjct 29731 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 29790 Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987 || |||||||| |||||||||||||| | ||||||||||||||| ||||| ||||| Sbjct 29791 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACG 29850 Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047 | || ||||| || || || ||| | || | ||| | ||| |||| ||||||| Sbjct 29851 CTGTCTGATTACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGT 29910 Query 156048 GGT 156050 ||| Sbjct 29911 GGT 29913 Score = 104 bits (114), Expect = 3e-17 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || ||||| || ||||| || || ||||| || ||| || Sbjct 29914 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 29973 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || ||||| || || || ||||| || ||||| || ||| Sbjct 29974 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCGGATCAA 30033 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||||||||||||||| |||||| ||||| || || || || | Sbjct 30034 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAACCTTGTCTGACTACA-- 30091 Query 156003 ATATCCAAA 156011 | ||||||| Sbjct 30092 ACATCCAAA 30100 Score = 102 bits (112), Expect = 1e-16 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 ||||| ||||| || ||||| || |||||||| || ||||||||||||| |||||||||| Sbjct 30264 AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAAG 30323 Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAGGCGACGCTTCA 156025 || || |||||| ||||| | || || || ||||| || ||| ||| | || ||||| Sbjct 30324 CAACTAGAAGATGGTAGAACGCTGTCGGACTACAATAT-TCAAAAGGAGTCCACTCTTCA 30382 Query 156026 TTTAGTGTTAAGATTAAGAGGCGGT 156050 | || || || || || || ||| Sbjct 30383 CCTTGTCTTGAGGTTGAGGGGTGGT 30407 >seq171 Length=339 Score = 131 bits (144), Expect = 2e-25 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| | || || || ||||| || |||| || ||| ||| Sbjct 153 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 212 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| |||| |||||| |||||||||||||| || ||||| || ||| Sbjct 213 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 272 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| |||||||| || |||||| ||||| || || || || | Sbjct 273 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACA-- 330 Query 156003 ATATCCAAA 156011 | ||||||| Sbjct 331 ACATCCAAA 339 Score = 120 bits (132), Expect = 4e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 ||||| ||||| || ||||| || |||||||| |||||||||||||||| ||| |||||| Sbjct 9 AAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCTGGTAAG 68 Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCAT 156026 || || ||||| ||||| | || |||||||| || |||||| | ||| | ||| Sbjct 69 CAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCAT 128 Query 156027 TTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| ||||| ||||| ||| Sbjct 129 TTGGTGTTGAGATTGAGAGGTGGT 152 >seq190 Length=102901 Score = 120 bits (132), Expect = 4e-22 Identities = 168/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || | || || || || || || |||||||| | ||||| ||| | Sbjct 8442 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8501 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | |||| || || || || || ||||| || ||||| || || || || Sbjct 8502 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8561 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | |||||| |||||||| || || || Sbjct 8562 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8621 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| || | || || || || || || ||||| ||||| |||| Sbjct 8622 A--ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTG 8673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731868258304400