Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766535.2_202014-10-
12] 409 sequences; 11,627,096 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq188 111 1e-19
>seq188
Length=53718
Score = 111 bits (122), Expect = 1e-19
Identities = 116/151 (77%), Gaps = 1/151 (1%)
Strand=Plus/Minus
Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802
|||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || |
Sbjct 30414 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 30355
Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862
||||||| || | | |||| || |||||||| ||||| || |||| || ||||||||
Sbjct 30354 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 30295
Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893
|| | || | || |||||||| | |||||
Sbjct 30294 CTGGAGGAATACCTTCCTTGTCTTGAATTTT 30264
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/235 (68%), Gaps = 10/235 (4%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || || | ||| || || || || | |||| ||||||||||||||| || || ||
Sbjct 29912 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 29853
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | | || || || ||||| ||||| ||||||| || ||| || ||| | ||
Sbjct 29852 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 29793
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCT 34925
| || |||||||| | ||||| || ||| |||| ||||| || |
Sbjct 29792 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT-----T 29738
Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
| || || | |||||||| || || || | ||||| || || |||||||| ||
Sbjct 29737 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 29683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691176523171
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |