Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766535.2_202014-10- 12] 409 sequences; 11,627,096 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq188 111 1e-19 seq171 100 2e-16 seq190 93.3 3e-14 >seq188 Length=53718 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| || Sbjct 29913 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 29854 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || | || || |||||||| ||||| | || |||||| | || Sbjct 29853 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 29794 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| | Sbjct 29793 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 29735 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || || || || || ||||||||| Sbjct 29734 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 29685 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 33563 TTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCA 33622 |||| |||||||| || || | || | | || || | || || |||||||| |||| Sbjct 30100 TTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCA 30041 Query 33623 AACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC- 33681 | | ||| ||||| | || | |||||| ||||| |||||| || ||| | || Sbjct 30040 ACCTCTGTTGATCCGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT-AACGTTATCG 29982 Query 33682 ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAG 33741 | |||||| ||||| || || | ||||| |||||||| || || || || |||||| Sbjct 29981 ATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAG 29922 Query 33742 ATCTGCATA 33750 ||||||||| Sbjct 29921 ATCTGCATA 29913 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| ||||| | || || | || |||||| ||| ||||| || ||||| || Sbjct 30410 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 30351 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 || || || | | || || | ||| || |||||||||||||| | ||||| ||| | Sbjct 30350 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 30291 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTC 33666 || | |||||| ||||| ||||||| Sbjct 30290 AGGAATACCTTCCTTGTCTTGAATTTTC 30263 >seq171 Length=339 Score = 100 bits (110), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||||||| | || |||||| || ||||| ||||| || Sbjct 152 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 93 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||| ||| || || ||||||||||| | || |||||| | || Sbjct 92 CAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGG 33 Query 33642 CACACCTTCTTTGTCGGCAATTTTC 33666 | |||||| ||||| ||||||| Sbjct 32 AATACCTTCCTTGTCTTGAATTTTC 8 >seq190 Length=102901 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || ||||| |||||||| || ||||| |||||||| |||| Sbjct 8673 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 8614 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || ||||| ||||| | || || || | | Sbjct 8613 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8554 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || | | |||| ||| | ||||| ||||| Sbjct 8553 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 8495 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| ||||| || || || || || ||||| Sbjct 8494 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702361513280