Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766555.2_202014-10-
12] 403 sequences; 11,647,300 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq263 118 9e-22
>seq263
Length=44401
Score = 118 bits (130), Expect = 9e-22
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 27530 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 27471
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 27470 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 27411
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
||| ||||||| ||| | | | || |||||||||| ||| || || | ||||
Sbjct 27410 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 27353
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||||||| | ||| || || |||||||||||
Sbjct 27352 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27315
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | |||||| || || | ||||| ||| |||||||||||| ||||| || |
Sbjct 28263 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 28204
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | || || || ||||||||| | |||| || | ||||| || ||
Sbjct 28203 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 28144
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || ||||||||| ||||||| ||| | | || || || | ||| ||
Sbjct 28143 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 28084
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | ||||| || ||||| || || || || |||||||| |||||
Sbjct 28083 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 28036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249130998403
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |