Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766575.2_202014-10- 12] 397 sequences; 11,616,647 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq270 122 2e-22 seq278 105 2e-17 seq180 95.1 3e-14 seq319 86.0 1e-11 >seq270 Length=47143 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||||||||| ||||| ||||||||||| | |||||||| | || || || ||| Sbjct 31587 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 31528 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| || ||||| ||||| || || | | |||||||| ||| ||| ||||| Sbjct 31527 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 31468 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || ||||| || ||| ||| || | ||||| | | ||| || || | || || Sbjct 31467 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 31408 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || ||||||||||| Sbjct 31407 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 31376 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || Sbjct 31362 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 31303 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || ||||| || || || || | | ||| || |||||| || |||||| Sbjct 31302 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 31243 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||| || || ||| || | ||||| | | ||| || || | || Sbjct 31242 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 31183 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || |||||||| || |||||||| Sbjct 31182 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 31148 >seq278 Length=174570 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || || Sbjct 47193 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 47134 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 47133 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 47074 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 47073 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 47014 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 47013 GGTCTTACCAGTCAAAGTCTTGACAAAA 46986 >seq180 Length=104256 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || || Sbjct 63123 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 63182 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 63183 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGNATACCTTCCTT 63242 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | |||||| | | ||| || ||||| ||||| Sbjct 63243 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 63302 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620 |||||||| || | ||| || || || Sbjct 63303 GGTCTTACCAGTCAAAGTCTTAACGAA 63329 >seq319 Length=102610 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct 94060 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 94001 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || |||||||| ||| | || |||||| Sbjct 94000 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 93966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915603341599