Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766575.2_202014-10-
12] 397 sequences; 11,616,647 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq270 118 8e-22
seq180 96.9 2e-15
>seq270
Length=47143
Score = 118 bits (130), Expect = 8e-22
Identities = 172/237 (73%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||||||||||||||| |||||| || |||||||||||||||||
Sbjct 31378 TTGCATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 31319
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | | | || || || ||||| || ||||| ||||| | ||| ||||
Sbjct 31318 GTCAGACAAGGT-TCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGAT 31260
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGC 44280
| | ||| | |||||| || || || || || || | ||| | || |||||||
Sbjct 31259 CCGGAGGGATACCTTCTTTATCTTGAATTTTACT--TTTGACGTTGTCAATAGTGTCGGA 31202
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || ||||| || || || || || ||||| ||||||||
Sbjct 31201 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 31145
Score = 114 bits (126), Expect = 9e-21
Identities = 168/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || || | ||| || || | ||| |||||| || |||||||||||
Sbjct 30882 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 30823
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || | |||| || |||||||| |||||||||||||| | || |||||||
Sbjct 30822 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 30763
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | ||||||||| || || ||| ||| || ||| | ||||| |||| ||||
Sbjct 30762 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 30704
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
| || |||| || || || || || || | ||||| ||||| || ||||| ||
Sbjct 30703 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 30649
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| ||
Sbjct 31150 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 31091
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || | |||| ||||| ||||| || ||||| ||||| | || |||||
Sbjct 31090 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATC 31031
Query 44224 TGAAGGCACACCTTCCTTTTC 44244
|| ||| | ||||||||| ||
Sbjct 31030 TGGAGGAATACCTTCCTTGTC 31010
>seq180
Length=104256
Score = 96.9 bits (106), Expect = 2e-15
Identities = 159/226 (70%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| | |||||| |||| || | ||| ||||||||||||||||| ||
Sbjct 63109 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 63168
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| | |||| |||| ||||| || ||||||||||| | || || || |
Sbjct 63169 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 63226
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | ||||||||| || ||||| ||| || ||| | |||||||| | ||
Sbjct 63227 GTGGNATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 63284
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
||| || |||| || || ||||| || || | ||||| ||||||
Sbjct 63285 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 63330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988658208949
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |