Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766595.2_202014-10-
12] 366 sequences; 11,605,909 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq183 125 1e-23
seq132 107 3e-18
seq251 86.0 9e-12
>seq183
Length=56988
Score = 125 bits (138), Expect = 1e-23
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| || ||||| || | ||||||||| || || || || || ||
Sbjct 23711 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 23770
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | ||| |||| ||| || ||||||||||||||||| || |||||||||||
Sbjct 23771 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 23830
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||||||||| ||| || ||| ||| ||
Sbjct 23831 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 23890
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
||||| || || || || ||||||| ||||| | ||| ||||||||
Sbjct 23891 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 23937
Score = 122 bits (134), Expect = 1e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || |||||||| || ||||| ||||| || |||||||| ||
Sbjct 23939 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 23998
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| ||||| | || || | ||| || |||||||||||||||||||| ||||| ||||||
Sbjct 23999 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGA 24058
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 24059 ATACCTTCCTTGTCTTG 24075
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| || | || || || | || | ||| || || ||| || ||||| || || ||
Sbjct 23483 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGA-ATATTGTAGTCCGA 23541
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|| ||||| | ||| |||| ||| || || |||||||||||||||||||| || |||||
Sbjct 23542 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 23601
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| || |||||
Sbjct 23602 AATACCTTCCTTGTCTTG 23619
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/237 (67%), Gaps = 2/237 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| || |||| || | |||||| || || || || || || ||||| ||
Sbjct 24223 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 24282
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| ||||| | || |||| || || || ||||| ||||||||||| ||||| |||||
Sbjct 24283 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 24342
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||||| ||| ||| |||
Sbjct 24343 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 24402
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT--TTTATTAG 146285
|| | ||| || |||||||| || || || || | ||| || ||||| | ||||||
Sbjct 24403 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 24459
>seq132
Length=105326
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || |||||||||||||| ||||| || || || || || ||
Sbjct 63170 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 63229
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | || || ||||| || |||||||| ||||||||||| || || || ||
Sbjct 63230 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63289
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 63290 ATACCTTCCTTGTCTTG 63306
>seq251
Length=177105
Score = 86.0 bits (94), Expect = 9e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| |||| ||||||||| || || || || || ||
Sbjct 176994 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 177053
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTG 146160
| |||||| | ||| || ||||| || |||||||| ||||||||||| ||
Sbjct 177054 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTG 177103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743522998366720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |