Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766595.2_202014-10-
12] 366 sequences; 11,605,909 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq252 179 3e-40
>seq252
Length=98767
Score = 179 bits (198), Expect = 3e-40
Identities = 562/857 (66%), Gaps = 39/857 (5%)
Strand=Plus/Plus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || |||||| ||||| || ||||| || ||
Sbjct 60352 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTA 60411
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || |||||||| |||||||| || |||| ||| | |||||||| ||
Sbjct 60412 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTT-CGACCTTGTAGTATTTCTT 60470
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | |||| |||||| || || ||||| | ||| || |||||||| ||
Sbjct 60471 GTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 60530
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || || | || || || |||| ||| ||| ||
Sbjct 60531 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAAT 60587
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | || | || || |||| | |
Sbjct 60588 TTCCACAGCCTCGGTGACAATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCA 60643
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| || |||||||| || |||||| ||||| ||||||| || | |
Sbjct 60644 AATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 60703
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| ||||| |||| ||| ||||| | |||| ||||| | ||| || || | ||||
Sbjct 60704 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 60763
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || ||||| | ||||||| | ||||| || | | ||||||||| ||
Sbjct 60764 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 60823
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 60824 -AGGCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTC 60878
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
|| | | || || || || || | | |||| ||| ||| || |||||
Sbjct 60879 TGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGT 60938
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||| ||| || |||| || ||||||||||| ||| ||||||||||| ||
Sbjct 60939 ATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTA 60998
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| | || ||||||| | | || |||| | |||||||| ||
Sbjct 60999 GAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 61058
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---ttttt 13602
||| || |||||| ||| || ||||| ||||| | || | | |||| | ||
Sbjct 61059 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTT 61118
Query 13603 ttCGTT--TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCA 13660
|||||| ||||| || ||| || | | ||| || || ||||| | || |||
Sbjct 61119 TTCGTTCATTCTG-----TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCA 61173
Query 13661 ACGGTCCAAAAAGAAGC 13677
||||||| ||||||||
Sbjct 61174 GCGGTCCAGAAAGAAGC 61190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430980477549132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |